RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 NLRP12P59046 1061 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TFCP2Q12800 502 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 C8orf37Q96NL8 207 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 THEGQ9P2T0 379 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 DDAH1O94760 285 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ITGA6P23229 1130 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 HOXC9P31274 260 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 C20orf194Q5TEA3 1177 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CLSTN2Q9H4D0 955 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PALM3A6NDB9 673 aaPredicted RBP12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 KRT3P12035 628 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SEPT2Q15019 361 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CPSF2Q9P2I0 782 aaKnown RBP12.38□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PRPF6O94906 941 aaKnown RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 BRD3Q15059 726 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CCDC169A6NNP5 214 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SRGAP2BP0DMP2 458 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 KPNA2P52292 529 aaKnown RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ALCAMQ13740 583 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PREX2Q70Z35 1606 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 HECW2Q9P2P5 1572 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TTLL7Q6ZT98 887 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MYOM2P54296 1465 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 STAT1P42224 750 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RPS6KA1Q15418 735 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SRRM1Q8IYB3 904 aaKnown RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 IFT81Q8WYA0 676 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 DNAJC8O75937 253 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 IRX3P78415 501 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RPAP1Q9BWH6 1393 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TMEM110-MUSTN1A8MSY1 372 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TROVE2P10155 538 aaKnown RBP eCLIP12.37□□□□□ -0.431e-7■□□□□ 9.3
ZKSCAN1-205ENST00000535170 HSPA1LP34931 641 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 KRT9P35527 623 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 DMP1Q13316 513 aaPredicted RBP12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ATP8B3O60423 1300 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 KCNA6P17658 529 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PTPREP23469 700 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CEP85LQ5SZL2 805 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RETREG2Q8NC44 543 aa12.37□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RNF40O75150 1001 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 AMFRQ9UKV5 643 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CTNND2Q9UQB3 1225 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 KDRP35968 1356 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GPAA1O43292 621 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ODR4Q5SWX8 454 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GPATCH4Q5T3I0 446 aaKnown RBP12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 NECAB1Q8N987 351 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MED23Q9ULK4 1368 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CCNA1P78396 465 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RINT1Q6NUQ1 792 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PEX26Q7Z412 305 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MPNDQ8N594 471 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GDPD2Q9HCC8 539 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 CDC42BPAQ5VT25 1732 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SATB1Q01826 763 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 BIRC2Q13490 618 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 FAM160B1Q5W0V3 765 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GCFC2P16383 781 aaKnown RBP12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MED4Q9NPJ6 270 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 LRWD1Q9UFC0 647 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MLH3Q9UHC1 1453 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TNNC2P02585 160 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 YARSP54577 528 aaKnown RBP12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ATP5JP18859 108 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RBM6P78332 1123 aaKnown RBP12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 WHAMMP3Q1A5X7 153 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GKAP1Q5VSY0 366 aaPredicted RBP12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 HHATQ5VTY9 493 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 BIN2Q9UBW5 565 aaPredicted RBP12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 SPHKAPQ2M3C7 1700 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MGEA5O60502 916 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ZNF445P59923 1031 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 EFCAB6Q5THR3 1501 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GAS7O60861 476 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 PHLDB3Q6NSJ2 640 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 IGSF3O75054 1194 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 ZNF202O95125 648 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 TFDP1Q14186 410 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GCKRQ14397 625 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RFX1P22670 979 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GARSP41250 739 aaKnown RBP12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 GABPAQ06546 454 aa12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 MTHFSDQ2M296 383 aaKnown RBP12.35□□□□□ -0.43
ZKSCAN1-205ENST00000535170 RSPH3Q86UC2 560 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms