RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	TDH	Q8IZJ6	230 aa		14.02	□□□□□ -0.17
CTNND1-238	ENST00000534647	ANTXR1	Q9H6X2	564 aa		14.02	□□□□□ -0.17
CTNND1-238	ENST00000534647	CABP5	Q9NP86	173 aa		14.02	□□□□□ -0.17
CTNND1-238	ENST00000534647	MSC	O60682	206 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	DSG3	P32926	999 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	GUCY1A2	P33402	732 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	SHMT1	P34896	483 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	PLCD1	P51178	756 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	RAB3GAP1	Q15042	981 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	HSP90AB4P	Q58FF6	505 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	MFSD14C	Q5VZR4	134 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	SLC17A8	Q8NDX2	589 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	FEZ1	Q99689	392 aa		14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	DDX60L	Q5H9U9	1706 aa	Known RBP	14.01	□□□□□ -0.17
CTNND1-238	ENST00000534647	STRN	O43815	780 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	SYN1	P17600	705 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	GRB14	Q14449	540 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	AACS	Q86V21	672 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	ACER1	Q8TDN7	264 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	14	□□□□□ -0.17
CTNND1-238	ENST00000534647	MFRP	Q9BY79	579 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	HOXC10	Q9NYD6	342 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	BTBD7	Q9P203	1132 aa		14	□□□□□ -0.17
CTNND1-238	ENST00000534647	MAGEB6P1	A0A0J9YX57	407 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	COG2	Q14746	738 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	ZYX	Q15942	572 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	LRRC26	Q2I0M4	334 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	KRI1	Q8N9T8	703 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	LPAR1	Q92633	364 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	UBE2O	Q9C0C9	1292 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	CWC22	Q9HCG8	908 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	FLRT1	Q9NZU1	646 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	NDUFB9	Q9Y6M9	179 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	IVNS1ABP	Q9Y6Y0	642 aa		13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.99	□□□□□ -0.17
CTNND1-238	ENST00000534647	POLR3D	P05423	398 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	ATP2B2	Q01814	1243 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	PDE4D	Q08499	809 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	SLC9C2	Q5TAH2	1124 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	DEFB123	Q8N688	67 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	SHCBP1	Q8NEM2	672 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	RHPN1	Q8TCX5	695 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	DDX20	Q9UHI6	824 aa	Known RBP	13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	EXOC6B	Q9Y2D4	811 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647	MYH1	P12882	1939 aa		13.98	□□□□□ -0.17
CTNND1-238	ENST00000534647		A0A1W2PRG0	241 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	PDE6A	P16499	860 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	SEPT2	Q15019	361 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	OLFML2B	Q68BL8	750 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	MB21D1	Q8N884	522 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	NPLOC4	Q8TAT6	608 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	MTMR10	Q9NXD2	777 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	MCM9	Q9NXL9	1143 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	STXBP5L	Q9Y2K9	1186 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	LAMA3	Q16787	3333 aa		13.97	□□□□□ -0.17
CTNND1-238	ENST00000534647	TCRBV5S4A2T	A0A5A2	114 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	DNM1L	O00429	736 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	DLL1	O00548	723 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	TRIM66	O15016	1216 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	CYBA	P13498	195 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	ABRA	Q8N0Z2	381 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	CLASRP	Q8N2M8	674 aa	Known RBP	13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	KIF1BP	Q96EK5	621 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	SWAP70	Q9UH65	585 aa		13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.96	□□□□□ -0.17
CTNND1-238	ENST00000534647	ZNF532	Q9HCE3	1301 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	MS4A1	P11836	297 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	WDR78	Q5VTH9	848 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	TMEM179	Q6ZVK1	233 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	SIAH1	Q8IUQ4	282 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	ARRDC4	Q8NCT1	418 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	TRPV1	Q8NER1	839 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	SPATC1L	Q9H0A9	340 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	MROH8	Q9H579	483 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	IL1RAPL2	Q9NP60	686 aa		13.95	□□□□□ -0.18
CTNND1-238	ENST00000534647	POTEB2	H3BUK9	544 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	NEFL	P07196	543 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	ADORA2A	P29274	412 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	CNGA1	P29973	690 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	CYP2C19	P33261	490 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	DPP9	Q86TI2	863 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	GPIHBP1	Q8IV16	184 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	CCDC17	Q96LX7	622 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	ATP8A2	Q9NTI2	1148 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	SLC5A4	Q9NY91	659 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	TMX2	Q9Y320	296 aa		13.94	□□□□□ -0.18
CTNND1-238	ENST00000534647	MPHOSPH10	O00566	681 aa	Known RBP	13.93	□□□□□ -0.18
CTNND1-238	ENST00000534647	RAB11FIP3	O75154	756 aa		13.93	□□□□□ -0.18
CTNND1-238	ENST00000534647	HMMR	O75330	724 aa		13.93	□□□□□ -0.18
CTNND1-238	ENST00000534647	ERCC3	P19447	782 aa		13.93	□□□□□ -0.18
CTNND1-238	ENST00000534647	KIAA1755	Q5JYT7	1200 aa		13.93	□□□□□ -0.18
CTNND1-238	ENST00000534647		Q7L0L9	218 aa		13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms