RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 ECM29Q5VYK3 1845 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 ATRNL1Q5VV63 1379 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 NOVP48745 357 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 TNNI2P48788 182 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 HTRA3P83110 453 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 KIF23Q02241 960 aaPredicted RBP17.76■□□□□ 0.43
ATG13-222ENST00000534610 DPF2Q92785 391 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 AIFM3Q96NN9 605 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 CSRNP1Q96S65 589 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 VEZTQ9HBM0 779 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
ATG13-222ENST00000534610 CLRN2A0PK11 232 aa17.75■□□□□ 0.43
ATG13-222ENST00000534610 FZD9O00144 591 aa17.75■□□□□ 0.43
ATG13-222ENST00000534610 PARP1P09874 1014 aaKnown RBP17.75■□□□□ 0.43
ATG13-222ENST00000534610 VEGFAP15692 232 aaPredicted RBP17.75■□□□□ 0.43
ATG13-222ENST00000534610 FUT2Q10981 343 aa17.75■□□□□ 0.43
ATG13-222ENST00000534610 SRBD1Q8N5C6 995 aaKnown RBP17.75■□□□□ 0.43
ATG13-222ENST00000534610 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
ATG13-222ENST00000534610 BRMS1Q9HCU9 246 aa17.75■□□□□ 0.43
ATG13-222ENST00000534610 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
ATG13-222ENST00000534610 MMP1P03956 469 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 GUCY1A2P33402 732 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 CAVIN1Q6NZI2 390 aaKnown RBP17.74■□□□□ 0.43
ATG13-222ENST00000534610 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 METTL16Q86W50 562 aaKnown RBP17.74■□□□□ 0.43
ATG13-222ENST00000534610 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
ATG13-222ENST00000534610 CABP5Q9NP86 173 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 CLIP2Q9UDT6 1046 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 MTMR7Q9Y216 660 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 GJA3Q9Y6H8 435 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 IGKV6D-41A0A0C4DH26 115 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
ATG13-222ENST00000534610 ZNF280AP59817 542 aaPredicted RBP17.74■□□□□ 0.43
ATG13-222ENST00000534610 TATDN1Q6P1N9 297 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 FAM83AQ86UY5 434 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.74■□□□□ 0.43
ATG13-222ENST00000534610 GJB4Q9NTQ9 266 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 MAD2L2Q9UI95 211 aa17.74■□□□□ 0.43
ATG13-222ENST00000534610 PALM3A6NDB9 673 aaPredicted RBP17.73■□□□□ 0.43
ATG13-222ENST00000534610 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.431e-9■■■■■ 28.5
ATG13-222ENST00000534610 SMARCA1P28370 1054 aa17.73■□□□□ 0.43
ATG13-222ENST00000534610 RBM26Q5T8P6 1007 aaKnown RBP17.73■□□□□ 0.43
ATG13-222ENST00000534610 MYSM1Q5VVJ2 828 aa17.73■□□□□ 0.43
ATG13-222ENST00000534610 FOXP1Q9H334 677 aaPredicted RBP17.73■□□□□ 0.43
ATG13-222ENST00000534610 KANSL2Q9H9L4 492 aa17.73■□□□□ 0.43
ATG13-222ENST00000534610 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.73■□□□□ 0.43
ATG13-222ENST00000534610 RCOR1Q9UKL0 485 aa17.73■□□□□ 0.43
ATG13-222ENST00000534610 CNTNAP5Q8WYK1 1306 aa17.73■□□□□ 0.43
ATG13-222ENST00000534610 KLRF2D3W0D1 207 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 WNT10BO00744 389 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 SCG2P13521 617 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 CEBPZQ03701 1054 aaKnown RBP17.72■□□□□ 0.43
ATG13-222ENST00000534610 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 ABCB5Q2M3G0 1257 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 DPY19L2Q6NUT2 758 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 TMEM179Q6ZVK1 233 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 DNAJC5GQ8N7S2 189 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 ZBED3Q96IU2 234 aaPredicted RBP17.72■□□□□ 0.43
ATG13-222ENST00000534610 L3MBTL3Q96JM7 780 aaPredicted RBP17.72■□□□□ 0.43
ATG13-222ENST00000534610 RTEL1Q9NZ71 1219 aa17.72■□□□□ 0.43
ATG13-222ENST00000534610 GMPSP49915 693 aaPredicted RBP17.71■□□□□ 0.43
ATG13-222ENST00000534610 ATP2B2Q01814 1243 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 FSTL1Q12841 308 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 SF3A1Q15459 793 aaKnown RBP17.71■□□□□ 0.43
ATG13-222ENST00000534610 PKN1Q16512 942 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 PFKFB3Q16875 520 aaPredicted RBP17.71■□□□□ 0.43
ATG13-222ENST00000534610 ASPRV1Q53RT3 343 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 DIS3L2Q8IYB7 885 aaKnown RBP17.71■□□□□ 0.43
ATG13-222ENST00000534610 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 CNOT7Q9UIV1 285 aaKnown RBP17.71■□□□□ 0.43
ATG13-222ENST00000534610 KCNJ14Q9UNX9 436 aa17.71■□□□□ 0.43
ATG13-222ENST00000534610 H7C1D1 291 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 STK38Q15208 465 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 TPRNQ4KMQ1 711 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 NOSTRINQ8IVI9 506 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 USP28Q96RU2 1077 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 SPZ1Q9BXG8 430 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 DNAJC18Q9H819 358 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 SH3GLB2Q9NR46 395 aa17.71■□□□□ 0.42
ATG13-222ENST00000534610 KIF28PB7ZC32 967 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 UBE2Q2LH0YL09 131 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 KRT2P35908 639 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 MICALL2Q8IY33 904 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 FAM177A1Q8N128 213 aaPredicted RBP17.7■□□□□ 0.42
ATG13-222ENST00000534610 PHF20Q9BVI0 1012 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 POLR3EQ9NVU0 708 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 VPS54Q9P1Q0 977 aa17.7■□□□□ 0.42
ATG13-222ENST00000534610 hCG_1642624A0A1W2PR95 340 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 FAM196BA6NMK8 535 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 TBC1D12O60347 775 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 LETM1O95202 739 aaPredicted RBP17.69■□□□□ 0.42
ATG13-222ENST00000534610 YEATS4O95619 227 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 CALML3P27482 149 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 NLRP5P59047 1200 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 USP17L2Q6R6M4 530 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 LRRC47Q8N1G4 583 aaKnown RBP17.69■□□□□ 0.42
ATG13-222ENST00000534610 SMC1BQ8NDV3 1235 aa17.69■□□□□ 0.42
ATG13-222ENST00000534610 KCNG4Q8TDN1 519 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms