RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 CCDC17Q96LX7 622 aa15.39■□□□□ 0.05
BEST1-208ENST00000534553 SDF4Q9BRK5 362 aa15.39■□□□□ 0.05
BEST1-208ENST00000534553 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
BEST1-208ENST00000534553 MAD2L2Q9UI95 211 aa15.39■□□□□ 0.05
BEST1-208ENST00000534553 MRVI1Q9Y6F6 885 aa15.39■□□□□ 0.05
BEST1-208ENST00000534553 NDUFA8P51970 172 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
BEST1-208ENST00000534553 RESP18Q5W5W9 173 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 ELOA2Q8IYF1 753 aaPredicted RBP15.38■□□□□ 0.05
BEST1-208ENST00000534553 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
BEST1-208ENST00000534553 A0A1B0GVL5 298 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 TRIM75PA6NK02 468 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 hCG_1984214I3L0E3 225 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 PARP1P09874 1014 aaKnown RBP15.38■□□□□ 0.05
BEST1-208ENST00000534553 PFKFB1P16118 471 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 SCNN1DP51172 638 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 NLRP5P59047 1200 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 NR5A1Q13285 461 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 AOC3Q16853 763 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 ZNF713Q8N859 430 aaPredicted RBP15.38■□□□□ 0.05
BEST1-208ENST00000534553 ANO10Q9NW15 660 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 FAM13BQ9NYF5 915 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 HPSEQ9Y251 543 aa15.38■□□□□ 0.05
BEST1-208ENST00000534553 ZNF202O95125 648 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 PTPREP23469 700 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 MARCKSP29966 332 aaPredicted RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 SYKP43405 635 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 TOB1P50616 345 aaPredicted RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 KIAA0825Q8IV33 1275 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 CEP95Q96GE4 821 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 CCDC34Q96HJ3 373 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 NAT10Q9H0A0 1025 aaKnown RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 CABP5Q9NP86 173 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 DDX4Q9NQI0 724 aaKnown RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 MTMR4Q9NYA4 1195 aa15.37■□□□□ 0.05
BEST1-208ENST00000534553 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 COL2A1P02458 1487 aaPredicted RBP15.37■□□□□ 0.05
BEST1-208ENST00000534553 ANO6Q4KMQ2 910 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 ASPRV1Q53RT3 343 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 DAGLBQ8NCG7 672 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 TNFRSF25Q93038 417 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 FERMT2Q96AC1 680 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 SRPRBQ9Y5M8 271 aaKnown RBP15.36■□□□□ 0.05
BEST1-208ENST00000534553 IGKV6D-41A0A0C4DH26 115 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 KLRF2D3W0D1 207 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 TTLL1O95922 423 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 ZNF165P49910 485 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 OXER1Q8TDS5 423 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 KIAA1468Q9P260 1216 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 CCDC39Q9UFE4 941 aa15.36■□□□□ 0.05
BEST1-208ENST00000534553 ZNF646O15015 1829 aaPredicted RBP15.35■□□□□ 0.05
BEST1-208ENST00000534553 C21orf2O43822 256 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 ENTPD3O75355 529 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 TGFB2P61812 414 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 NPY5RQ15761 445 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 SHC4Q6S5L8 630 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 DEFB132Q7Z7B7 95 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 BARHL2Q9NY43 387 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 PCDHA4Q9UN74 947 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 KIF13BQ9NQT8 1826 aa15.35■□□□□ 0.05
BEST1-208ENST00000534553 RBM5P52756 815 aaKnown RBP eCLIP15.34■□□□□ 0.05
BEST1-208ENST00000534553 KANK3Q6NY19 840 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 FOXP4Q8IVH2 680 aaPredicted RBP15.34■□□□□ 0.05
BEST1-208ENST00000534553 CEP57L1Q8IYX8 460 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 BLIDQ8IZY5 108 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 STAG2Q8N3U4 1231 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 SHISA4Q96DD7 197 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 RRP36Q96EU6 259 aaKnown RBP15.34■□□□□ 0.05
BEST1-208ENST00000534553 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
BEST1-208ENST00000534553 SEC63Q9UGP8 760 aaKnown RBP15.34■□□□□ 0.05
BEST1-208ENST00000534553 FBXO2Q9UK22 296 aaPredicted RBP15.34■□□□□ 0.05
BEST1-208ENST00000534553 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
BEST1-208ENST00000534553 hCG_1642624A0A1W2PR95 340 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 SNHG28P0DPA3 235 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 PYM1Q9BRP8 204 aaKnown RBP15.33■□□□□ 0.05
BEST1-208ENST00000534553 TRIM34Q9BYJ4 488 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 CBX8Q9HC52 389 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 USP25Q9UHP3 1055 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 HDAC9Q9UKV0 1011 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 KCNH3Q9ULD8 1083 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 ATRNL1Q5VV63 1379 aa15.33■□□□□ 0.05
BEST1-208ENST00000534553 ESPNB1AK53 854 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 GNA11P29992 359 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 SHMT1P34896 483 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 MMP14P50281 582 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 TTC38Q5R3I4 469 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 GPATCH4Q5T3I0 446 aaKnown RBP15.33■□□□□ 0.04
BEST1-208ENST00000534553 KCNQ5Q9NR82 932 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 PSME4Q14997 1843 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 SCN9AQ15858 1988 aa15.33■□□□□ 0.04
BEST1-208ENST00000534553 GOLGA6L19H0YKK7 550 aa15.32■□□□□ 0.04
BEST1-208ENST00000534553 PDHBP11177 359 aa15.32■□□□□ 0.04
BEST1-208ENST00000534553 AKR1B1P15121 316 aa15.32■□□□□ 0.04
BEST1-208ENST00000534553 NFIAQ12857 509 aa15.32■□□□□ 0.04
BEST1-208ENST00000534553 RSBN1LQ6PCB5 846 aaPredicted RBP15.32■□□□□ 0.04
BEST1-208ENST00000534553 ZSCAN30Q86W11 494 aa15.32■□□□□ 0.04
BEST1-208ENST00000534553 METTL16Q86W50 562 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms