RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
CTSB-230ENST00000534149 POLR3DP05423 398 aaPredicted RBP18.16■□□□□ 0.5
CTSB-230ENST00000534149 OLFML2BQ68BL8 750 aa18.16■□□□□ 0.5
CTSB-230ENST00000534149 RIOK1Q9BRS2 568 aaKnown RBP18.16■□□□□ 0.5
CTSB-230ENST00000534149 TANGO6Q9C0B7 1094 aa18.16■□□□□ 0.5
CTSB-230ENST00000534149 PRDM5Q9NQX1 630 aaPredicted RBP18.16■□□□□ 0.5
CTSB-230ENST00000534149 KBTBD13C9JR72 458 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 ERCC3P19447 782 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 GABPAQ06546 454 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 COG2Q14746 738 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 SHHQ15465 462 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 C9orf50Q5SZB4 431 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 SLC39A5Q6ZMH5 540 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 ARRDC4Q8NCT1 418 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 SPATC1LQ9H0A9 340 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 CDH23Q9H251 3354 aa18.15■□□□□ 0.5
CTSB-230ENST00000534149 PRUNE2Q8WUY3 3088 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 COBLO75128 1261 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 TRIM60Q495X7 471 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 HOXC10Q9NYD6 342 aa18.14■□□□□ 0.49
CTSB-230ENST00000534149 MYH8P13535 1937 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 SEPT4O43236 478 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 STRNO43815 780 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 KIAA1755Q5JYT7 1200 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 PRAMEF19Q5SWL8 479 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 AACSQ86V21 672 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
CTSB-230ENST00000534149 SHCBP1Q8NEM2 672 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 BADQ92934 168 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 CDX2Q99626 313 aaPredicted RBP18.13■□□□□ 0.49
CTSB-230ENST00000534149 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
CTSB-230ENST00000534149 ADCYAP1R1P41586 468 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 PLS1Q14651 629 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 TMED8Q6PL24 325 aaPredicted RBP18.12■□□□□ 0.49
CTSB-230ENST00000534149 SLC44A5Q8NCS7 719 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 FERMT2Q96AC1 680 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 CRNKL1Q9BZJ0 848 aaKnown RBP18.12■□□□□ 0.49
CTSB-230ENST00000534149 PDLIM7Q9NR12 457 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 EXOC6BQ9Y2D4 811 aa18.12■□□□□ 0.49
CTSB-230ENST00000534149 ZNFX1Q9P2E3 1918 aaKnown RBP18.11■□□□□ 0.49
CTSB-230ENST00000534149 SMCHD1A6NHR9 2005 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 CYP2D6P10635 497 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 RLBP1P12271 317 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 PDE6AP16499 860 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 SNX17Q15036 470 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 LRRC41Q15345 812 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 FAM47AQ5JRC9 791 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
CTSB-230ENST00000534149 SH3RF1Q7Z6J0 888 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 NCAPG2Q86XI2 1143 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 CLEC10AQ8IUN9 316 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 SDR42E1Q8WUS8 393 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 ATG4CQ96DT6 458 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 SEMA6BQ9H3T3 888 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 PARP14Q460N5 1801 aa18.11■□□□□ 0.49
CTSB-230ENST00000534149 COL11A1P12107 1806 aaPredicted RBP18.1■□□□□ 0.49
CTSB-230ENST00000534149 TRIM43BA6NCK2 446 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 FLOT1O75955 427 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 DSG3P32926 999 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 SLC9C2Q5TAH2 1124 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 TMEM179Q6ZVK1 233 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 MB21D1Q8N884 522 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 MAFAQ8NHW3 353 aaPredicted RBP18.1■□□□□ 0.49
CTSB-230ENST00000534149 TRIM43Q96BQ3 446 aaPredicted RBP18.1■□□□□ 0.49
CTSB-230ENST00000534149 MAML3Q96JK9 1138 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 SLC5A4Q9NY91 659 aa18.1■□□□□ 0.49
CTSB-230ENST00000534149 SPTBN5Q9NRC6 3674 aaKnown RBP18.1■□□□□ 0.49
CTSB-230ENST00000534149 ZNF532Q9HCE3 1301 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 TTF1Q15361 905 aaPredicted RBP18.09■□□□□ 0.49
CTSB-230ENST00000534149 ERC1Q8IUD2 1116 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 ABRAQ8N0Z2 381 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 LCORLQ8N3X6 602 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 DYNLL2Q96FJ2 89 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 TTYH1Q9H313 450 aaPredicted RBP18.09■□□□□ 0.49
CTSB-230ENST00000534149 MROH8Q9H579 483 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 IL1RAPL2Q9NP60 686 aa18.09■□□□□ 0.49
CTSB-230ENST00000534149 DCP1AQ9NPI6 582 aaPredicted RBP18.09■□□□□ 0.49
CTSB-230ENST00000534149 BAZ2AQ9UIF9 1905 aaKnown RBP18.08■□□□□ 0.49
CTSB-230ENST00000534149 AKR1B1P15121 316 aa18.08■□□□□ 0.48
CTSB-230ENST00000534149 SMAD3P84022 425 aaKnown RBP18.08■□□□□ 0.48
CTSB-230ENST00000534149 SIAH1Q8IUQ4 282 aa18.08■□□□□ 0.48
CTSB-230ENST00000534149 PLXNA1Q9UIW2 1896 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 TCRBV5S4A2TA0A5A2 114 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 FCER1AP12319 257 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 ITGB8P26012 769 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 TLE2Q04725 743 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 ICA1Q05084 483 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 C1orf53Q5VUE5 145 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 DNAJC2Q99543 621 aaKnown RBP18.07■□□□□ 0.48
CTSB-230ENST00000534149 VCPKMTQ9H867 229 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 ARHGEF10LQ9HCE6 1279 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 SWAP70Q9UH65 585 aa18.07■□□□□ 0.48
CTSB-230ENST00000534149 GOLIM4O00461 696 aa18.06■□□□□ 0.48
CTSB-230ENST00000534149 TMEM132BQ14DG7 1078 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms