RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 ERICH2A1L162 156 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 IGF2BP3O00425 579 aaKnown RBP eCLIP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 IFIT3O14879 490 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 IRF6O14896 467 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 FKTNO75072 461 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 POLR3DP05423 398 aaPredicted RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 CYP2D6P10635 497 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 PTPRAP18433 802 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 MKRN3Q13064 507 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 SEC23AQ15436 765 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 CCL15Q16663 113 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 CCDC178Q5BJE1 867 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 TMEM67Q5HYA8 995 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 C16orf86Q6ZW13 317 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 FASTKD5Q7L8L6 764 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 CTU1Q7Z7A3 348 aaKnown RBP11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 ANKRD23Q86SG2 305 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 TTC6Q86TZ1 520 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 IQCA1Q86XH1 822 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 NECAB1Q8N987 351 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 UBAC1Q9BSL1 405 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 INCENPQ9NQS7 918 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 TSKSQ9UJT2 592 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 SLC45A1Q9Y2W3 748 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 PLIN4Q96Q06 1357 aa11.77□□□□□ -0.53
LDLRAD3-206ENST00000534091 MYH4Q9Y623 1939 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 KLF18A0A0U1RQI7 1052 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 SMIM22K7EJ46 135 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 BRD1O95696 1058 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 PDCP20941 246 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 GJB2P29033 226 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 GABPAQ06546 454 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 WTAPQ15007 396 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 RRP12Q5JTH9 1297 aaKnown RBP11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 APOA5Q6Q788 366 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 RGS22Q8NE09 1264 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 BRI3BPQ8WY22 251 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 PTPN18Q99952 460 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 TRIM34Q9BYJ4 488 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 GPHNQ9NQX3 736 aaPredicted RBP11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 TOMM22Q9NS69 142 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 TCP11L1Q9NUJ3 509 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 BRPF3Q9ULD4 1205 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 HPS5Q9UPZ3 1129 aa11.76□□□□□ -0.53
LDLRAD3-206ENST00000534091 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 GOLGA8BA8MQT2 603 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 RANBP6O60518 1105 aaKnown RBP11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 TBC1D8O95759 1140 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 ASNSP08243 561 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 CAP2P40123 477 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 PLCD1P51178 756 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 PPP2R5BQ15173 497 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 NSUN7Q8NE18 718 aaKnown RBP11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZNF296Q8WUU4 475 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 ANKS1AQ92625 1134 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZSCAN10Q96SZ4 725 aaPredicted RBP11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 AS3MTQ9HBK9 375 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 SWAP70Q9UH65 585 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 PTPRFP10586 1907 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 TNKSO95271 1327 aa11.75□□□□□ -0.53
LDLRAD3-206ENST00000534091 ATAD5Q96QE3 1844 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 A0A0G2JLL6 359 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZBTB43O43298 467 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 TLR2O60603 784 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 GNRH1P01148 92 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 EVX2Q03828 476 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 STK3Q13188 491 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 CRHR2Q13324 411 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 DGKZQ13574 1117 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 TAF1CQ15572 869 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 ENAHQ8N8S7 591 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 GBP4Q96PP9 640 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 KIF3AQ9Y496 699 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 SLC12A7Q9Y666 1083 aa11.74□□□□□ -0.53
LDLRAD3-206ENST00000534091 TSPY2A6NKD2 308 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 USP17L5A8MUK1 530 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 BTBD19C9JJ37 291 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 STX6O43752 255 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 PRDM1O75626 825 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 CDKL5O76039 1030 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 DDAH1O94760 285 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 CTDNEP1O95476 244 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 RASA1P20936 1047 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SYT1P21579 422 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 CDK8P49336 464 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 SP3Q02447 781 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 PKP1Q13835 747 aa11.73□□□□□ -0.53
LDLRAD3-206ENST00000534091 NFKBIBQ15653 356 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms