RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 TMX2Q9Y320 296 aa22.67■■□□□ 1.22
LRRK1-210ENST00000534045 IVNS1ABPQ9Y6Y0 642 aa22.67■■□□□ 1.22
LRRK1-210ENST00000534045 SMIM22K7EJ46 135 aa22.66■■□□□ 1.22
LRRK1-210ENST00000534045 HMGCRP04035 888 aa22.66■■□□□ 1.22
LRRK1-210ENST00000534045 SAMD1Q6SPF0 538 aaPredicted RBP22.66■■□□□ 1.22
LRRK1-210ENST00000534045 GPR142Q7Z601 462 aa22.66■■□□□ 1.22
LRRK1-210ENST00000534045 SPICE1Q8N0Z3 855 aa22.66■■□□□ 1.22
LRRK1-210ENST00000534045 U2AF1L4Q8WU68 220 aaKnown RBP22.66■■□□□ 1.22
LRRK1-210ENST00000534045 PORCNQ9H237 461 aa22.66■■□□□ 1.22
LRRK1-210ENST00000534045 DOCK3Q8IZD9 2030 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 EEF2P13639 858 aaKnown RBP22.65■■□□□ 1.22
LRRK1-210ENST00000534045 PDE1AP54750 535 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 TRMT44Q8IYL2 757 aaKnown RBP22.65■■□□□ 1.22
LRRK1-210ENST00000534045 IFNL3Q8IZI9 196 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 DEFB118Q96PH6 123 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 SEC62Q99442 399 aaKnown RBP22.65■■□□□ 1.22
LRRK1-210ENST00000534045 LNPKQ9C0E8 428 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 NAPBQ9H115 298 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 VCPKMTQ9H867 229 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 GOPCQ9HD26 462 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 TNRC18O15417 2968 aaPredicted RBP22.65■■□□□ 1.22
LRRK1-210ENST00000534045 CENPFP49454 3210 aa22.65■■□□□ 1.22
LRRK1-210ENST00000534045 FLOT1O75955 427 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 SGPL1O95470 568 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 CAPN2P17655 700 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 RGS2P41220 211 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 ZMYM1Q5SVZ6 1142 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 LBX2Q6XYB7 198 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 CLEC10AQ8IUN9 316 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 EXOC6Q8TAG9 804 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
LRRK1-210ENST00000534045 STAP2Q9UGK3 403 aa22.64■■□□□ 1.21
LRRK1-210ENST00000534045 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.21
LRRK1-210ENST00000534045 SPDYE16A6NNV3 312 aaPredicted RBP22.63■■□□□ 1.21
LRRK1-210ENST00000534045 XRCC5P13010 732 aaKnown RBP22.63■■□□□ 1.21
LRRK1-210ENST00000534045 PDE4BQ07343 736 aa22.63■■□□□ 1.21
LRRK1-210ENST00000534045 SIAH1Q8IUQ4 282 aa22.63■■□□□ 1.21
LRRK1-210ENST00000534045 TRIM6-TRIM34B2RNG4 842 aa22.62■■□□□ 1.21
LRRK1-210ENST00000534045 WDR46O15213 610 aaKnown RBP22.62■■□□□ 1.21
LRRK1-210ENST00000534045 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
LRRK1-210ENST00000534045 PLS1Q14651 629 aa22.62■■□□□ 1.21
LRRK1-210ENST00000534045 MB21D1Q8N884 522 aa22.62■■□□□ 1.21
LRRK1-210ENST00000534045 DPF3Q92784 378 aa22.62■■□□□ 1.21
LRRK1-210ENST00000534045 BTBD7Q9P203 1132 aa22.62■■□□□ 1.21
LRRK1-210ENST00000534045 RPTORQ8N122 1335 aa22.61■■□□□ 1.21
LRRK1-210ENST00000534045 CNMDO75829 334 aa22.61■■□□□ 1.21
LRRK1-210ENST00000534045 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.61■■□□□ 1.21
LRRK1-210ENST00000534045 EPB41L4AQ9HCS5 686 aaPredicted RBP22.61■■□□□ 1.21
LRRK1-210ENST00000534045 SALL3Q9BXA9 1300 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 RASA1P20936 1047 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 DSG3P32926 999 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 MAP2K5Q13163 448 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 POTEEQ6S8J3 1075 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 SMC5Q8IY18 1101 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 RILPL2Q969X0 211 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 HTATIP2Q9BUP3 242 aa22.6■■□□□ 1.21
LRRK1-210ENST00000534045 SLC15A5A6NIM6 579 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 PRDM1O75626 825 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 FARP2O94887 1054 aaPredicted RBP22.59■■□□□ 1.21
LRRK1-210ENST00000534045 PTPREP23469 700 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 KIAA1755Q5JYT7 1200 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 MORN1Q5T089 497 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 CHD1LQ86WJ1 897 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 TRIB2Q92519 343 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 SHISA4Q96DD7 197 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 PAK6Q9NQU5 681 aaPredicted RBP22.59■■□□□ 1.21
LRRK1-210ENST00000534045 HELLSQ9NRZ9 838 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 CLIP2Q9UDT6 1046 aa22.59■■□□□ 1.21
LRRK1-210ENST00000534045 STRNO43815 780 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 TSPY3P0CV98 308 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 TSPY8P0CW00 308 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 PPARAQ07869 468 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 MFSD14CQ5VZR4 134 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 DPP9Q86TI2 863 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 APBA2Q99767 749 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 SPATC1LQ9H0A9 340 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 NYAP2Q9P242 653 aa22.58■■□□□ 1.21
LRRK1-210ENST00000534045 IGHDP01880 384 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 PRKAR2AP13861 404 aaKnown RBP22.57■■□□□ 1.2
LRRK1-210ENST00000534045 TRIM32Q13049 653 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 CCDC129Q6ZRS4 1044 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 NCAPG2Q86XI2 1143 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 ATG4CQ96DT6 458 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 MOV10L1Q9BXT6 1211 aaKnown RBP22.57■■□□□ 1.2
LRRK1-210ENST00000534045 SLC5A4Q9NY91 659 aa22.57■■□□□ 1.2
LRRK1-210ENST00000534045 CTDP1Q9Y5B0 961 aaPredicted RBP22.57■■□□□ 1.2
LRRK1-210ENST00000534045 ROBO3Q96MS0 1386 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 F5H6K3 240 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 KLRC3Q07444 240 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 MCMDC2Q4G0Z9 681 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 TICAM2Q86XR7 235 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 USP6NLQ92738 828 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.56■■□□□ 1.2
LRRK1-210ENST00000534045 MROH8Q9H579 483 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 PLXNB2O15031 1838 aa22.56■■□□□ 1.2
LRRK1-210ENST00000534045 ERCC3P19447 782 aa22.55■■□□□ 1.2
LRRK1-210ENST00000534045 TFAP4Q01664 338 aa22.55■■□□□ 1.2
LRRK1-210ENST00000534045 NUCB1Q02818 461 aa22.55■■□□□ 1.2
LRRK1-210ENST00000534045 CCL14Q16627 93 aa22.55■■□□□ 1.2
LRRK1-210ENST00000534045 FAM83BQ5T0W9 1011 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms