RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 OLFML2BQ68BL8 750 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 TATDN1Q6P1N9 297 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 LBX2Q6XYB7 198 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 NCAPG2Q86XI2 1143 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 MAGEB6Q8N7X4 407 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 TRIM43Q96BQ3 446 aaPredicted RBP11.28□□□□□ -0.6
PACS1-214ENST00000533811 SPATC1LQ9H0A9 340 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 TTC28Q96AY4 2481 aa11.28□□□□□ -0.6
PACS1-214ENST00000533811 COBLO75128 1261 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 POLR3DP05423 398 aaPredicted RBP11.27□□□□□ -0.61
PACS1-214ENST00000533811 RAG1P15918 1043 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 RARSP54136 660 aaKnown RBP11.27□□□□□ -0.61
PACS1-214ENST00000533811 SEPT2Q15019 361 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 SNX17Q15036 470 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 TTC6Q86TZ1 520 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 USP38Q8NB14 1042 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 PPM1EQ8WY54 764 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 TNNQ9UQP3 1299 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.61
PACS1-214ENST00000533811 A0A0G2JMZ2 1700 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 COL11A1P12107 1806 aaPredicted RBP11.26□□□□□ -0.61
PACS1-214ENST00000533811 CDH23Q9H251 3354 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 STRNO43815 780 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 PQBP1O60828 265 aaKnown RBP11.26□□□□□ -0.61
PACS1-214ENST00000533811 CLTBP09497 229 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 COL9A1P20849 921 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 ITGB8P26012 769 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 SHMT1P34896 483 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 EPHB4P54760 987 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 COG2Q14746 738 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 TJAP1Q5JTD0 557 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
PACS1-214ENST00000533811 CLUAP1Q96AJ1 413 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 CCDC8Q9H0W5 538 aaPredicted RBP11.26□□□□□ -0.61
PACS1-214ENST00000533811 EHD4Q9H223 541 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 GPR108Q9NPR9 543 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 XPNPEP3Q9NQH7 507 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 HOXC10Q9NYD6 342 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
PACS1-214ENST00000533811 TACC3Q9Y6A5 838 aa11.26□□□□□ -0.61
PACS1-214ENST00000533811 SURF6O75683 361 aaKnown RBP11.25□□□□□ -0.61
PACS1-214ENST00000533811 FLOT1O75955 427 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 PGK1P00558 417 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 RARBP10826 455 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 DNAJB2P25686 324 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 GUCY1A2P33402 732 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 PLCD1P51178 756 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 GRIN2CQ14957 1233 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 CERS3Q8IU89 383 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 TRMT2AQ8IZ69 625 aaKnown RBP11.25□□□□□ -0.61
PACS1-214ENST00000533811 SHCBP1Q8NEM2 672 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 ARHGAP45Q92619 1136 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 TMEM39AQ9NV64 488 aa11.25□□□□□ -0.61
PACS1-214ENST00000533811 TMEM265A0A087WTH1 108 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 A0A1W2PRG0 241 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 TNFRSF10AO00220 468 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 BCAR3O75815 825 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 IGHA2P01877 340 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 TRIM27P14373 513 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 EVX2Q03828 476 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 FPGSQ05932 587 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 MAP3K12Q12852 859 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 RNF180Q86T96 592 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 SPICE1Q8N0Z3 855 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 LENG1Q96BZ8 264 aaPredicted RBP11.24□□□□□ -0.61
PACS1-214ENST00000533811 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 MAML3Q96JK9 1138 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 MROH8Q9H579 483 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 RAPGEFL1Q9UHV5 662 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
PACS1-214ENST00000533811 PHF24Q9UPV7 400 aa11.24□□□□□ -0.61
PACS1-214ENST00000533811 SPTBN5Q9NRC6 3674 aaKnown RBP11.24□□□□□ -0.61
PACS1-214ENST00000533811 PARP14Q460N5 1801 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 A0A1W2PQ45 241 aaPredicted RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 A0A1W2PQY0 241 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 IPO8O15397 1037 aaKnown RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 FCER1AP12319 257 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 DSG3P32926 999 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 C1orf53Q5VUE5 145 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 CCDC129Q6ZRS4 1044 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 CLEC10AQ8IUN9 316 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 MB21D1Q8N884 522 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 TIFAQ96CG3 184 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 ZNF512BQ96KM6 892 aaPredicted RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 GAS2L1Q99501 681 aaPredicted RBP11.23□□□□□ -0.61
PACS1-214ENST00000533811 MMP19Q99542 508 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 ZNF576Q9H609 170 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 ANTXR1Q9H6X2 564 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 MCM9Q9NXL9 1143 aa11.23□□□□□ -0.61
PACS1-214ENST00000533811 MAGEB6P1A0A0J9YX57 407 aa11.22□□□□□ -0.61
PACS1-214ENST00000533811 DCDC2CA8MYV0 355 aa11.22□□□□□ -0.61
PACS1-214ENST00000533811 KIAA0355O15063 1070 aa11.22□□□□□ -0.61
PACS1-214ENST00000533811 IGSF3O75054 1194 aa11.22□□□□□ -0.61
PACS1-214ENST00000533811 PGK2P07205 417 aa11.22□□□□□ -0.61
PACS1-214ENST00000533811 TAL1P17542 331 aaPredicted RBP11.22□□□□□ -0.61
PACS1-214ENST00000533811 POLA2Q14181 598 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms