RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 RNF20Q5VTR2 975 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 SMCR8Q8TEV9 937 aaPredicted RBP23.4■■□□□ 1.34
CHEK1-215ENST00000533778 PHIPQ8WWQ0 1821 aa23.4■■□□□ 1.34
CHEK1-215ENST00000533778 CYP2C8P10632 490 aa23.39■■□□□ 1.33
CHEK1-215ENST00000533778 VCAM1P19320 739 aa23.39■■□□□ 1.33
CHEK1-215ENST00000533778 IQCA1Q86XH1 822 aa23.39■■□□□ 1.33
CHEK1-215ENST00000533778 STX8Q9UNK0 236 aa23.39■■□□□ 1.33
CHEK1-215ENST00000533778 PCNTO95613 3336 aa23.38■■□□□ 1.33
CHEK1-215ENST00000533778 NEDD4P46934 1319 aa23.38■■□□□ 1.33
CHEK1-215ENST00000533778 EIF5BO60841 1220 aaKnown RBP23.38■■□□□ 1.33
CHEK1-215ENST00000533778 TTC14Q96N46 770 aa23.38■■□□□ 1.33
CHEK1-215ENST00000533778 ASCC2Q9H1I8 757 aaPredicted RBP23.38■■□□□ 1.33
CHEK1-215ENST00000533778 R3HDMLQ9H3Y0 253 aa23.38■■□□□ 1.33
CHEK1-215ENST00000533778 IL17RBQ9NRM6 502 aa23.38■■□□□ 1.33
CHEK1-215ENST00000533778 WDR46O15213 610 aaKnown RBP23.37■■□□□ 1.33
CHEK1-215ENST00000533778 FKTNO75072 461 aa23.37■■□□□ 1.33
CHEK1-215ENST00000533778 KDM4AO75164 1064 aa23.37■■□□□ 1.33
CHEK1-215ENST00000533778 GCLCP48506 637 aaPredicted RBP23.37■■□□□ 1.33
CHEK1-215ENST00000533778 NECTIN1Q15223 517 aa23.37■■□□□ 1.33
CHEK1-215ENST00000533778 CATSPERGQ6ZRH7 1159 aa23.37■■□□□ 1.33
CHEK1-215ENST00000533778 GTF3C2Q8WUA4 911 aaPredicted RBP23.37■■□□□ 1.33
CHEK1-215ENST00000533778 RPAP3Q9H6T3 665 aaPredicted RBP23.37■■□□□ 1.33
CHEK1-215ENST00000533778 B4E1Z4 1266 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 RAD21O60216 631 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 NOVP48745 357 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 SP3Q02447 781 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 C17orf99Q6UX52 265 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 RALYLQ86SE5 291 aaKnown RBP23.36■■□□□ 1.33
CHEK1-215ENST00000533778 GMCL1P1Q8NEA9 526 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 NCOA7Q8NI08 942 aa23.36■■□□□ 1.33
CHEK1-215ENST00000533778 ZNF296Q8WUU4 475 aaPredicted RBP23.36■■□□□ 1.33
CHEK1-215ENST00000533778 E7EWF7 191 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 F5H6K3 240 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 SLC27A2O14975 620 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 EPB41L2O43491 1005 aaKnown RBP23.35■■□□□ 1.33
CHEK1-215ENST00000533778 NMT2O60551 498 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 KLRC3Q07444 240 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 CREB3L3Q68CJ9 461 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 DGKHQ86XP1 1220 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 SPICE1Q8N0Z3 855 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 UBAC1Q9BSL1 405 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 TANGO6Q9C0B7 1094 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 ZSWIM5Q9P217 1185 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 CPA4Q9UI42 421 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 GTF3C3Q9Y5Q9 886 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 MYH8P13535 1937 aa23.35■■□□□ 1.33
CHEK1-215ENST00000533778 TOP1P11387 765 aaKnown RBP23.34■■□□□ 1.33
CHEK1-215ENST00000533778 ZKSCAN1P17029 563 aaPredicted RBP23.34■■□□□ 1.33
CHEK1-215ENST00000533778 ARHGEF6Q15052 776 aa23.34■■□□□ 1.33
CHEK1-215ENST00000533778 ERO1AQ96HE7 468 aa23.34■■□□□ 1.33
CHEK1-215ENST00000533778 P2RX7Q99572 595 aaKnown RBP23.34■■□□□ 1.33
CHEK1-215ENST00000533778 HOXC10Q9NYD6 342 aa23.34■■□□□ 1.33
CHEK1-215ENST00000533778 ADGRA2Q96PE1 1338 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 NDUFB10O96000 172 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 HERVK_113P62684 666 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 COG2Q14746 738 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 KIF22Q14807 665 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 KIAA1755Q5JYT7 1200 aa23.33■■□□□ 1.33
CHEK1-215ENST00000533778 LRRC47Q8N1G4 583 aaKnown RBP23.33■■□□□ 1.33
CHEK1-215ENST00000533778 ZSCAN10Q96SZ4 725 aaPredicted RBP23.33■■□□□ 1.33
CHEK1-215ENST00000533778 LOC285556D6RIA3 1793 aa23.32■■□□□ 1.32
CHEK1-215ENST00000533778 SLFN13Q68D06 897 aa23.32■■□□□ 1.32
CHEK1-215ENST00000533778 BCRP11274 1271 aa23.31■■□□□ 1.32
CHEK1-215ENST00000533778 SART3Q15020 963 aaKnown RBP23.31■■□□□ 1.32
CHEK1-215ENST00000533778 GMCL1Q96IK5 515 aa23.31■■□□□ 1.32
CHEK1-215ENST00000533778 TMEM47Q9BQJ4 181 aa23.31■■□□□ 1.32
CHEK1-215ENST00000533778 ZKSCAN3Q9BRR0 538 aa23.31■■□□□ 1.32
CHEK1-215ENST00000533778 GREB1LQ9C091 1923 aaPredicted RBP23.31■■□□□ 1.32
CHEK1-215ENST00000533778 PTPRFP10586 1907 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 ERICH2A1L162 156 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 FLOT1O75955 427 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 KRT32Q14532 448 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 FAM110CQ1W6H9 321 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 TSGA10IPQ3SY00 556 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 FAM83BQ5T0W9 1011 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 LBX2Q6XYB7 198 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 ANKRD13CQ8N6S4 541 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 ANKS1AQ92625 1134 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 LAMA4Q16363 1823 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 MYPNQ86TC9 1320 aa23.3■■□□□ 1.32
CHEK1-215ENST00000533778 SLC1A4P43007 532 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 STOX1Q6ZVD7 989 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 GPRC5AQ8NFJ5 357 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 NKX2-3Q8TAU0 364 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 TAF6LQ9Y6J9 622 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 TNKSO95271 1327 aa23.29■■□□□ 1.32
CHEK1-215ENST00000533778 BMP3P12645 472 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 HSPA4P34932 840 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 LACTBP83111 547 aaPredicted RBP23.28■■□□□ 1.32
CHEK1-215ENST00000533778 RCSD1Q6JBY9 416 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 MB21D1Q8N884 522 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 DCAF4Q8WV16 495 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 MTA3Q9BTC8 594 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 KAT14Q9H8E8 782 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 MORF4L1Q9UBU8 362 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 FEM1BQ9UK73 627 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 RABGAP1Q9Y3P9 1069 aa23.28■■□□□ 1.32
CHEK1-215ENST00000533778 MCCP23508 829 aa23.27■■□□□ 1.32
CHEK1-215ENST00000533778 DSG3P32926 999 aa23.27■■□□□ 1.32
CHEK1-215ENST00000533778 MCM5P33992 734 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms