RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSKU-204ENST00000533752 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
TSKU-204ENST00000533752 SRRDQ9UH36 339 aa18.79■□□□□ 0.6
TSKU-204ENST00000533752 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSKU-204ENST00000533752 IGKV6D-41A0A0C4DH26 115 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 TNPO2O14787 897 aaKnown RBP18.78■□□□□ 0.6
TSKU-204ENST00000533752 ORC4O43929 436 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 LBX2Q6XYB7 198 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 GPRC5AQ8NFJ5 357 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 NEDD1Q8NHV4 660 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 DSCC1Q9BVC3 393 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 TANGO6Q9C0B7 1094 aa18.78■□□□□ 0.6
TSKU-204ENST00000533752 MYPNQ86TC9 1320 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 TTLL1O95922 423 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 NT5C2P49902 561 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 CTDSPL2Q05D32 466 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 COA7Q96BR5 231 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 RNF41Q9H4P4 317 aaPredicted RBP18.77■□□□□ 0.6
TSKU-204ENST00000533752 MTMR4Q9NYA4 1195 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 CTNNA3Q9UI47 895 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 RABGAP1Q9Y3P9 1069 aa18.77■□□□□ 0.6
TSKU-204ENST00000533752 TSPY2A6NKD2 308 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 FGRP09769 529 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 CTGFP29279 349 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 ERVK-9P63128 1117 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 ERVK-24P63145 666 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 CCNA1P78396 465 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 TFAP4Q01664 338 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 SLC9C1Q4G0N8 1177 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 NBPF11Q86T75 865 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 CEP95Q96GE4 821 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 HOXC10Q9NYD6 342 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 PTCH2Q9Y6C5 1203 aa18.76■□□□□ 0.59
TSKU-204ENST00000533752 ZSWIM8A7E2V4 1837 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 CHMLP26374 656 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 COG2Q14746 738 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 SPICE1Q8N0Z3 855 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 MB21D1Q8N884 522 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 RAET1EQ8TD07 263 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 STAG1Q8WVM7 1258 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 ARMC5Q96C12 935 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 PAGR1Q9BTK6 254 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 MGAMO43451 1857 aa18.75■□□□□ 0.59
TSKU-204ENST00000533752 HTTP42858 3142 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 SPDYE16A6NNV3 312 aaPredicted RBP18.74■□□□□ 0.59
TSKU-204ENST00000533752 ZNF213O14771 459 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 RAD21O60216 631 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 RANBP6O60518 1105 aaKnown RBP18.74■□□□□ 0.59
TSKU-204ENST00000533752 FLOT1O75955 427 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 ECM2O94769 699 aaPredicted RBP18.74■□□□□ 0.59
TSKU-204ENST00000533752 MAPK4P31152 587 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 IMMTQ16891 758 aaKnown RBP18.74■□□□□ 0.59
TSKU-204ENST00000533752 FAM47AQ5JRC9 791 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 AKNAD1Q5T1N1 836 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 MFSD6Q6ZSS7 791 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 CCAR1Q8IX12 1150 aaKnown RBP18.74■□□□□ 0.59
TSKU-204ENST00000533752 MKL1Q969V6 931 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 TXNRD2Q9NNW7 524 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 RBPJLQ9UBG7 517 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 CLIP2Q9UDT6 1046 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 LAMA4Q16363 1823 aa18.74■□□□□ 0.59
TSKU-204ENST00000533752 HAND2P61296 217 aa18.73■□□□□ 0.59
TSKU-204ENST00000533752 PRKCZQ05513 592 aa18.73■□□□□ 0.59
TSKU-204ENST00000533752 BMP2KLQ5H9B9 411 aa18.73■□□□□ 0.59
TSKU-204ENST00000533752 KIAA1755Q5JYT7 1200 aa18.73■□□□□ 0.59
TSKU-204ENST00000533752 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
TSKU-204ENST00000533752 F5H6K3 240 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 DSG3P32926 999 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 KLRC3Q07444 240 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 IRF5Q13568 498 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 SLAIN1Q8ND83 568 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 SOCS4Q8WXH5 440 aa18.72■□□□□ 0.59
TSKU-204ENST00000533752 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
TSKU-204ENST00000533752 NDUFB10O96000 172 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 FLT3LGP49771 235 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 RRP12Q5JTH9 1297 aaKnown RBP18.71■□□□□ 0.59
TSKU-204ENST00000533752 FAM83BQ5T0W9 1011 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 TBC1D10CQ8IV04 446 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 ESR2Q92731 530 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 STX8Q9UNK0 236 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 A0A0G2JMZ2 1700 aa18.71■□□□□ 0.59
TSKU-204ENST00000533752 MYH4Q9Y623 1939 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 SGSM2O43147 1006 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 CNMDO75829 334 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 GRK4P32298 578 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 LRRC47Q8N1G4 583 aaKnown RBP18.7■□□□□ 0.58
TSKU-204ENST00000533752 ZNF333Q96JL9 665 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 NBPF3Q9H094 633 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 IL25Q9H293 177 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 INCENPQ9NQS7 918 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 TCP11L1Q9NUJ3 509 aa18.7■□□□□ 0.58
TSKU-204ENST00000533752 POTEEQ6S8J3 1075 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 PXYLP1Q8TE99 480 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 SLF1Q9BQI6 1058 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 CNNM2Q9H8M5 875 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 IL17RBQ9NRM6 502 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 BTBD7Q9P203 1132 aa18.69■□□□□ 0.58
TSKU-204ENST00000533752 PPP1R9AQ9ULJ8 1098 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms