RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ZNF365Q70YC5 407 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 CMTR1Q8N1G2 835 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 UBL4BQ8N7F7 174 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 SSH3Q8TE77 659 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 CTTNBP2NLQ9P2B4 639 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ADGRL2O95490 1459 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 KLRF2D3W0D1 207 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ZNF202O95125 648 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 YWHAEP62258 255 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 IRX5P78411 483 aaPredicted RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 UAP1Q16222 522 aaPredicted RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 GEN1Q17RS7 908 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 CFAP157Q5JU67 520 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 SPICE1Q8N0Z3 855 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 ADPGKQ9BRR6 497 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 TTLL3Q9Y4R7 772 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 SEMA3EO15041 775 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 OSBPP22059 807 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 HSPA4P34932 840 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 EAF2Q96CJ1 260 aaPredicted RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 MED10Q9BTT4 135 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 DDX23Q9BUQ8 820 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 KCNK9Q9NPC2 374 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 CALCOCO1Q9P1Z2 691 aa7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 THRAP3Q9Y2W1 955 aaKnown RBP7.09□□□□□ -1.27
UBQLN1-206ENST00000533705 DTNBO60941 627 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 BBOX1O75936 387 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 PDE8BO95263 885 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 CCDC93Q567U6 631 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 CYP26C1Q6V0L0 522 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 SYT10Q6XYQ8 523 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 CEP128Q6ZU80 1094 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 ARHGEF25Q86VW2 580 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 BLIDQ8IZY5 108 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 ARFGAP2Q8N6H7 521 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 STAMQ92783 540 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 CLSTN2Q9H4D0 955 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 HAUS2Q9NVX0 235 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 STIM2Q9P246 746 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 ZKSCAN5Q9Y2L8 839 aa7.09□□□□□ -1.28
UBQLN1-206ENST00000533705 TNKSO95271 1327 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 DYNC1I1O14576 645 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 SEC24BO95487 1268 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 TUBBP07437 444 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 RHOXF2BP0C7M4 288 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 TMOD1P28289 359 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 POSTNQ15063 836 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 BEND3Q5T5X7 828 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 SESTD1Q86VW0 696 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 GPIHBP1Q8IV16 184 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 SMC1BQ8NDV3 1235 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CCT6BQ92526 530 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 RHOXF2Q9BQY4 288 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 ST7Q9NRC1 585 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 PCDHB13Q9Y5F0 798 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 KIF24Q5T7B8 1368 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 PLEKHG1Q9ULL1 1385 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 JAK2O60674 1132 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CRCPO75575 148 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 ERFEQ4G0M1 354 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CCDC17Q96LX7 622 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 TM6SF1Q9BZW5 370 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 TRIM7Q9C029 511 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 AP5M1Q9H0R1 490 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CD2APQ9Y5K6 639 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 POLA2Q14181 598 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 ANKS4BQ8N8V4 417 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 FANCBQ8NB91 859 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 WDR17Q8IZU2 1322 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 LIG4P49917 911 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 FANCCQ00597 558 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 IFRD2Q12894 506 aaPredicted RBP7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 LRMPQ12912 555 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CLUL1Q15846 466 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 CCDC84Q86UT8 332 aaPredicted RBP7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 GPBP1Q86WP2 473 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 IPO4Q8TEX9 1081 aaKnown RBP7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 MMS19Q96T76 1030 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 TAB2Q9NYJ8 693 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 PCDHA12Q9UN75 941 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 NFE2L3Q9Y4A8 694 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 MLH3Q9UHC1 1453 aa7.08□□□□□ -1.28
UBQLN1-206ENST00000533705 PHKA1P46020 1223 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 KLHL30Q0D2K2 578 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 CC2D2BQ6DHV5 1058 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 PLA2G4DQ86XP0 818 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 SLFN12Q8IYM2 578 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 ABI1Q8IZP0 508 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 KRT222Q8N1A0 295 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 GSDMBQ8TAX9 411 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 NELFBQ8WX92 580 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 PLXNC1O60486 1568 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 H0YCG3 227 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 CSPG5O95196 566 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 XRCC6P12956 609 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 RNASE9P60153 205 aaKnown RBP7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 ARHGAP44Q17R89 818 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 KRT26Q7Z3Y9 468 aa7.07□□□□□ -1.28
UBQLN1-206ENST00000533705 UBLCP1Q8WVY7 318 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms