RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 C16orf86Q6ZW13 317 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 FLAD1Q8NFF5 587 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 EYA3Q99504 573 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 FBXO2Q9UK22 296 aaPredicted RBP13.72□□□□□ -0.21
CLP1-205ENST00000533682 G3V3G9 751 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 SCG2P13521 617 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 KRT2P35908 639 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 PNOCQ13519 176 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 TYW1BQ6NUM6 668 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 CLEC10AQ8IUN9 316 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
CLP1-205ENST00000533682 JMYQ8N9B5 988 aa13.72□□□□□ -0.21
CLP1-205ENST00000533682 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
CLP1-205ENST00000533682 SNED1Q8TER0 1413 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 XBP1P17861 261 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 CACNB3P54284 484 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 FOXP4Q8IVH2 680 aaPredicted RBP13.71□□□□□ -0.21
CLP1-205ENST00000533682 SMAP1Q8IYB5 467 aaPredicted RBP13.71□□□□□ -0.21
CLP1-205ENST00000533682 PDILTQ8N807 584 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 CEP95Q96GE4 821 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 SCN9AQ15858 1988 aa13.71□□□□□ -0.21
CLP1-205ENST00000533682 CUTAO60888 179 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 OFD1O75665 1012 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 ZNF174Q15697 407 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 PFKFB3Q16875 520 aaPredicted RBP13.71□□□□□ -0.22
CLP1-205ENST00000533682 C17orf53Q8N3J3 647 aaPredicted RBP13.71□□□□□ -0.22
CLP1-205ENST00000533682 RASGRP4Q8TDF6 673 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 TNFRSF25Q93038 417 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 TRIM5Q9C035 493 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 NRBP1Q9UHY1 535 aa13.71□□□□□ -0.22
CLP1-205ENST00000533682 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.22
CLP1-205ENST00000533682 H0YIN7 160 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 PLCG2P16885 1265 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 PTPREP23469 700 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 EIF6P56537 245 aaKnown RBP13.7□□□□□ -0.22
CLP1-205ENST00000533682 NLRP5P59047 1200 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 NFIAQ12857 509 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 SLC15A2Q16348 729 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 USP17L2Q6R6M4 530 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 KIAA0825Q8IV33 1275 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 AOPEPQ8N6M6 819 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 ANKS1AQ92625 1134 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 USP40Q9NVE5 1235 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 ANO10Q9NW15 660 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 KIF5BP33176 963 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 PIK3AP1Q6ZUJ8 805 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 METTL16Q86W50 562 aaKnown RBP13.7□□□□□ -0.22
CLP1-205ENST00000533682 CSRNP2Q9H175 543 aa13.7□□□□□ -0.22
CLP1-205ENST00000533682 POLR2DO15514 142 aaKnown RBP13.69□□□□□ -0.22
CLP1-205ENST00000533682 GRM4Q14833 912 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 APOBEC3HQ6NTF7 200 aaKnown RBP13.69□□□□□ -0.22
CLP1-205ENST00000533682 CDC42EP5Q6NZY7 148 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 GRAMD1CQ8IYS0 662 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 EPSTI1Q96J88 318 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 CAMKK2Q96RR4 588 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 TMX4Q9H1E5 349 aaPredicted RBP13.69□□□□□ -0.22
CLP1-205ENST00000533682 TCP11L1Q9NUJ3 509 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 FAM237AA0A1B0GTK4 181 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 TRIM75PA6NK02 468 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 IGSF3O75054 1194 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 PDE4CQ08493 712 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.69□□□□□ -0.22
CLP1-205ENST00000533682 NEDD1Q8NHV4 660 aa13.69□□□□□ -0.22
CLP1-205ENST00000533682 BECN2A8MW95 431 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 ZNF75DP51815 510 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 CNNM3Q8NE01 707 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 KCNF1Q9H3M0 494 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 VAT1LQ9HCJ6 419 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 SRPRBQ9Y5M8 271 aaKnown RBP13.68□□□□□ -0.22
CLP1-205ENST00000533682 FOCADQ5VW36 1801 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 A0A087X0B3 334 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 PALM3A6NDB9 673 aaPredicted RBP13.68□□□□□ -0.22
CLP1-205ENST00000533682 FAM196BA6NMK8 535 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 AKR1B1P15121 316 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 TCP10Q12799 353 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 AOC3Q16853 763 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 KRBA2Q6ZNG9 492 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
CLP1-205ENST00000533682 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 PTGS1P23219 599 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 PTGDRQ13258 359 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 SHROOM1Q2M3G4 852 aaPredicted RBP13.67□□□□□ -0.22
CLP1-205ENST00000533682 WWC2Q6AWC2 1192 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 HEATR3Q7Z4Q2 680 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 DEFB132Q7Z7B7 95 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 UBA5Q9GZZ9 404 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 SERTAD1Q9UHV2 236 aa13.67□□□□□ -0.22
CLP1-205ENST00000533682 USP17L5A8MUK1 530 aa13.66□□□□□ -0.22
CLP1-205ENST00000533682 HMGB2P26583 209 aaKnown RBP13.66□□□□□ -0.22
CLP1-205ENST00000533682 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms