RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 POLR3DP05423 398 aaPredicted RBP19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 CNGA1P29973 690 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 SHMT1P34896 483 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 C20orf194Q5TEA3 1177 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 ERC1Q8IUD2 1116 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 EDC3Q96F86 508 aaKnown RBP19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 BTBD7Q9P203 1132 aa19.06■□□□□ 0.64
CHMP4A-207ENST00000533523 BDP1A6H8Y1 2624 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 MAGEB6P1A0A0J9YX57 407 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 MPHOSPH10O00566 681 aaKnown RBP19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 PTPREP23469 700 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 PLCD1P51178 756 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 ATP2B2Q01814 1243 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 COG6Q9Y2V7 657 aa19.05■□□□□ 0.64
CHMP4A-207ENST00000533523 GRB14Q14449 540 aa19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 SEPT2Q15019 361 aa19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 FAM109BQ6ICB4 259 aaPredicted RBP19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 TMED8Q6PL24 325 aaPredicted RBP19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 RIOK1Q9BRS2 568 aaKnown RBP19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 CRNKL1Q9BZJ0 848 aaKnown RBP19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 TANGO6Q9C0B7 1094 aa19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 IL1RAPL2Q9NP60 686 aa19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 DDX20Q9UHI6 824 aaKnown RBP19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 PLXNA1Q9UIW2 1896 aa19.04■□□□□ 0.64
CHMP4A-207ENST00000533523 PDE6AP16499 860 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 CYP2C19P33261 490 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 GUCY1A2P33402 732 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 LBX2Q6XYB7 198 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 NPLOC4Q8TAT6 608 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 SENP6Q9GZR1 1112 aaPredicted RBP19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 BCL11AQ9H165 835 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 MCM9Q9NXL9 1143 aa19.03■□□□□ 0.64
CHMP4A-207ENST00000533523 SMCHD1A6NHR9 2005 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 APBB1O00213 710 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 MSCO60682 206 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 HMMRO75330 724 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 ATN1P54259 1190 aaPredicted RBP19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 EVX2Q03828 476 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 TTF1Q15361 905 aaPredicted RBP19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 SLC9C2Q5TAH2 1124 aa19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 RPAP2Q8IXW5 612 aaPredicted RBP19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 DNAJC2Q99543 621 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-207ENST00000533523 HOXC6P09630 235 aa19.01■□□□□ 0.63
CHMP4A-207ENST00000533523 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
CHMP4A-207ENST00000533523 PRDM6Q9NQX0 595 aa19.01■□□□□ 0.63
CHMP4A-207ENST00000533523 ZBTB40Q9NUA8 1239 aa19.01■□□□□ 0.63
CHMP4A-207ENST00000533523 ZNF532Q9HCE3 1301 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 GOLIM4O00461 696 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 ADORA2AP29274 412 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 GABPAQ06546 454 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 DPP9Q86TI2 863 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 LCORLQ8N3X6 602 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 SLC44A5Q8NCS7 719 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 TRPV1Q8NER1 839 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 SDR42E1Q8WUS8 393 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 LPAR1Q92633 364 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 CRBNQ96SW2 442 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
CHMP4A-207ENST00000533523 MOV10L1Q9BXT6 1211 aaKnown RBP19■□□□□ 0.63
CHMP4A-207ENST00000533523 TTYH1Q9H313 450 aaPredicted RBP19■□□□□ 0.63
CHMP4A-207ENST00000533523 RAPGEFL1Q9UHV5 662 aa19■□□□□ 0.63
CHMP4A-207ENST00000533523 A0A1W2PRG0 241 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 DNM1LO00429 736 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 CYP2D6P10635 497 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 CYBAP13498 195 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 PLS1Q14651 629 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 C9orf50Q5SZB4 431 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 SAMD1Q6SPF0 538 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 RHPN1Q8TCX5 695 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 CDX2Q99626 313 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 PRKAG2Q9UGJ0 569 aa18.99■□□□□ 0.63
CHMP4A-207ENST00000533523 MYCNP04198 464 aaPredicted RBP18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 RTP1P59025 263 aa18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 ANO1Q5XXA6 986 aa18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 TMEM179Q6ZVK1 233 aa18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 CLEC10AQ8IUN9 316 aa18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 SPATC1LQ9H0A9 340 aa18.98■□□□□ 0.63
CHMP4A-207ENST00000533523 KBTBD13C9JR72 458 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 IFIT2P09913 472 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 ERCC3P19447 782 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 COG2Q14746 738 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 GJC2Q5T442 439 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 OLFML2BQ68BL8 750 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 CLASRPQ8N2M8 674 aaKnown RBP18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 ARMT1Q9H993 441 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 DCP1AQ9NPI6 582 aaPredicted RBP18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 HOXC10Q9NYD6 342 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 ATP11BQ9Y2G3 1177 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 GTF3C3Q9Y5Q9 886 aa18.97■□□□□ 0.63
CHMP4A-207ENST00000533523 TCRBV5S4A2TA0A5A2 114 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 FLOT1O75955 427 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 ICA1Q05084 483 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 KIAA1755Q5JYT7 1200 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 NCAPG2Q86XI2 1143 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 SPICE1Q8N0Z3 855 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 MB21D1Q8N884 522 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 SHCBP1Q8NEM2 672 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 EXOC6Q8TAG9 804 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 MYLIPQ8WY64 445 aa18.96■□□□□ 0.63
CHMP4A-207ENST00000533523 DYNLL2Q96FJ2 89 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms