RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CHMLP26374 656 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 ERVK-24P63145 666 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 ALX1Q15699 326 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 POTEEQ6S8J3 1075 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 TMEM106CQ9BVX2 250 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 RPAP3Q9H6T3 665 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 VCPKMTQ9H867 229 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 MKNK2Q9HBH9 465 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 HOXC10Q9NYD6 342 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 GJD2Q9UKL4 321 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 GABRQQ9UN88 632 aa15.39■□□□□ 0.05
TRAPPC4-212ENST00000533058 FOXP2O15409 715 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 CDC45O75419 566 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 MAPK4P31152 587 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 COG2Q14746 738 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 SH3TC2Q8TF17 1288 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 NAPBQ9H115 298 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 NYAP2Q9P242 653 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 SYNPO2Q9UMS6 1093 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 CCDC171Q6TFL3 1326 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 ZSWIM8A7E2V4 1837 aa15.38■□□□□ 0.05
TRAPPC4-212ENST00000533058 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 ADCY3O60266 1144 aa15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 ECM2O94769 699 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 SLC3A2P08195 630 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 EEF2P13639 858 aaKnown RBP15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 PDE4BQ07343 736 aa15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 PPARAQ07869 468 aa15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 Q3C1V9 767 aa15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 ZNF589Q86UQ0 364 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 ZNF444Q8N0Y2 327 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC4-212ENST00000533058 IGKV6D-41A0A0C4DH26 115 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 SPDYE16A6NNV3 312 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 WDR46O15213 610 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 CNMDO75829 334 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 CAPN2P17655 700 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 UBXN2AP68543 259 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 CCNA1P78396 465 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 KIAA1755Q5JYT7 1200 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 MB21D1Q8N884 522 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 MKL1Q969V6 931 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 ANAPC4Q9UJX5 808 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 ZMYM6O95789 1325 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 RAD50Q92878 1312 aa15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 KIAA0100Q14667 2235 aaKnown RBP15.36■□□□□ 0.05
TRAPPC4-212ENST00000533058 FGRP09769 529 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 XRCC5P13010 732 aaKnown RBP15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 DSG3P32926 999 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 VPS53Q5VIR6 699 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 CLEC10AQ8IUN9 316 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 NEDD1Q8NHV4 660 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 SOCS4Q8WXH5 440 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 PAGR1Q9BTK6 254 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 GOPCQ9HD26 462 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 MGAMO43451 1857 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 PLIN4Q96Q06 1357 aa15.35■□□□□ 0.05
TRAPPC4-212ENST00000533058 PPP4R3BQ5MIZ7 849 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 GPR142Q7Z601 462 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 NKX2-3Q8TAU0 364 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 USP6NLQ92738 828 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 NUDT12Q9BQG2 462 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 PORCNQ9H237 461 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 BTBD7Q9P203 1132 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 ADAMTS5Q9UNA0 930 aa15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 RBBP6Q7Z6E9 1792 aaKnown RBP15.34■□□□□ 0.05
TRAPPC4-212ENST00000533058 PEX10O60683 326 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 PRDM1O75626 825 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 FGAP02671 866 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 GJB1P08034 283 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 HSPD1P10809 573 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 MTFR1Q15390 333 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 MORN1Q5T089 497 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 PLEKHH3Q7Z736 793 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 CCAR1Q8IX12 1150 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 TRMT44Q8IYL2 757 aaKnown RBP15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 SPICE1Q8N0Z3 855 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 STK11IPQ8N1F8 1099 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 ESYT1Q9BSJ8 1104 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 TANGO6Q9C0B7 1094 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 MTMR4Q9NYA4 1195 aa15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 GREB1LQ9C091 1923 aaPredicted RBP15.33■□□□□ 0.04
TRAPPC4-212ENST00000533058 F5H6K3 240 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 SGSM2O43147 1006 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 ORC4O43929 436 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 FLOT1O75955 427 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 TTLL1O95922 423 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 HMGCRP04035 888 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 CCL5P13501 91 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 EN2P19622 333 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 ATP2B2Q01814 1243 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 KLRC3Q07444 240 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
TRAPPC4-212ENST00000533058 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms