RNA–Protein interactions for RNA: ENST00000532932.5

LTBP3-221, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 3,327 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-221ENST00000532932 PPM1EQ8WY54 764 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 EEF2KMTQ96G04 330 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 PATL2C9JE40 543 aaKnown RBP16.68■□□□□ 0.26
LTBP3-221ENST00000532932 WNT7AO00755 349 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 NDUFA10O95299 355 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 SYF2O95926 243 aaKnown RBP16.68■□□□□ 0.26
LTBP3-221ENST00000532932 USP14P54578 494 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 MAP9Q49MG5 647 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 FANCBQ8NB91 859 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 NELFBQ8WX92 580 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 KRT23Q9C075 422 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 GNL3LQ9NVN8 582 aaKnown RBP16.68■□□□□ 0.26
LTBP3-221ENST00000532932 AATFQ9NY61 560 aaKnown RBP eCLIP16.68■□□□□ 0.26
LTBP3-221ENST00000532932 ADAMTSL3P82987 1691 aa16.68■□□□□ 0.26
LTBP3-221ENST00000532932 A0A0G2JS52 829 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 PPFIA4O75335 1185 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 GGCXP38435 758 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 CORO7P57737 925 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 DNAJC21Q5F1R6 531 aaKnown RBP16.67■□□□□ 0.26
LTBP3-221ENST00000532932 ZNF654Q8IZM8 581 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.67■□□□□ 0.26
LTBP3-221ENST00000532932 SAR1BQ9Y6B6 198 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 USP54Q70EL1 1684 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 ARFGEF2Q9Y6D5 1785 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 SIPA1L3O60292 1781 aaPredicted RBP16.67■□□□□ 0.26
LTBP3-221ENST00000532932 CCDC196A0A1B0GTZ2 297 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 TUBBP07437 444 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 FKBP15Q5T1M5 1219 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 TTC19Q6DKK2 380 aaPredicted RBP16.67■□□□□ 0.26
LTBP3-221ENST00000532932 HPCAL4Q9UM19 191 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 C4AP0C0L4 1744 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 RPS6KA5O75582 802 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 XBP1P17861 261 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 AMPD2Q01433 879 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 CNNM2Q9H8M5 875 aa16.67■□□□□ 0.26
LTBP3-221ENST00000532932 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
LTBP3-221ENST00000532932 CCT5P48643 541 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 PAK1Q13153 545 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 E2F4Q16254 413 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 GPIHBP1Q8IV16 184 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 CTCFLQ8NI51 663 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-221ENST00000532932 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-221ENST00000532932 JADE2Q9NQC1 790 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 GDAQ9Y2T3 454 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 ANKRD18BA2A2Z9 1011 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 ZNF185O15231 689 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 KRT2P35908 639 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 MATR3P43243 847 aaKnown RBP eCLIP16.66■□□□□ 0.26
LTBP3-221ENST00000532932 LIG3P49916 1009 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.66■□□□□ 0.26
LTBP3-221ENST00000532932 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 MYO1AQ9UBC5 1043 aa16.66■□□□□ 0.26
LTBP3-221ENST00000532932 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
LTBP3-221ENST00000532932 TTC26A0AVF1 554 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 WDR93Q6P2C0 686 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 ISCA1Q9BUE6 129 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 LUC7L2Q9Y383 392 aaKnown RBP16.65■□□□□ 0.26
LTBP3-221ENST00000532932 MAP3K15Q6ZN16 1313 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 MACROD2A1Z1Q3 448 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 KIF6Q6ZMV9 814 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 EHD4Q9H223 541 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 DEF6Q9H4E7 631 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 TRIM49BA6NDI0 452 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 MAP3K12Q12852 859 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 PTGDRQ13258 359 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 FAM76AQ8TAV0 307 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 JAKMIP2Q96AA8 810 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 NACAP1Q9BZK3 213 aa16.65■□□□□ 0.26
LTBP3-221ENST00000532932 MYBL2P10244 700 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 C2orf54Q08AI8 447 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 TRAPPC11Q7Z392 1133 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 LCORLQ8N3X6 602 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 PRDM11Q9NQV5 511 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 SEMA3EO15041 775 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 SPAG1Q07617 926 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 OR8K1Q8NGG5 319 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 COG1Q8WTW3 980 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 LIMA1Q9UHB6 759 aaKnown RBP16.64■□□□□ 0.25
LTBP3-221ENST00000532932 ITIH6Q6UXX5 1313 aa16.64■□□□□ 0.25
LTBP3-221ENST00000532932 GOLGA6CA6NDK9 693 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 GSG1L2A8MUP6 293 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 IPO7O95373 1038 aaKnown RBP16.63■□□□□ 0.25
LTBP3-221ENST00000532932 GOLGA6DP0CG33 693 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 MCM7P33993 719 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 TTC38Q5R3I4 469 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 SH3RF1Q7Z6J0 888 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
LTBP3-221ENST00000532932 GOLGA6AQ9NYA3 693 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 XDHP47989 1333 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 SLIT3O75094 1523 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 SMIM22K7EJ46 135 aa16.63■□□□□ 0.25
LTBP3-221ENST00000532932 PCCAP05165 728 aaPredicted RBP16.63■□□□□ 0.25
LTBP3-221ENST00000532932 EIF5P55010 431 aaKnown RBP16.63■□□□□ 0.25
LTBP3-221ENST00000532932 SHISA4Q96DD7 197 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms