RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SYN1P17600 705 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 ATP5JP18859 108 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 KIAA1755Q5JYT7 1200 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 C20orf194Q5TEA3 1177 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 HAUS7Q99871 368 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 RCAN3Q9UKA8 241 aa20.64■□□□□ 0.89
RPUSD4-207ENST00000532800 A0A1W2PPC1 479 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 SLC15A5A6NIM6 579 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 GLRX3O76003 335 aaKnown RBP20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 AKR1B1P15121 316 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 GRB14Q14449 540 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 TMEM179Q6ZVK1 233 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 NPLOC4Q8TAT6 608 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 GDF15Q99988 308 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 TANGO6Q9C0B7 1094 aa20.63■□□□□ 0.89
RPUSD4-207ENST00000532800 PARP14Q460N5 1801 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 ZNF236Q9UL36 1845 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 COL6A1P12109 1028 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 SWAP70Q9UH65 585 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 IVNS1ABPQ9Y6Y0 642 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 DNAH12Q6ZR08 3092 aa20.62■□□□□ 0.89
RPUSD4-207ENST00000532800 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 HOXC6P09630 235 aa20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 SIAH1Q8IUQ4 282 aa20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 LRCH3Q96II8 777 aa20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 MOV10L1Q9BXT6 1211 aaKnown RBP20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 ATP8A2Q9NTI2 1148 aa20.61■□□□□ 0.89
RPUSD4-207ENST00000532800 CYP2C19P33261 490 aa20.6■□□□□ 0.89
RPUSD4-207ENST00000532800 ICA1Q05084 483 aa20.6■□□□□ 0.89
RPUSD4-207ENST00000532800 COG2Q14746 738 aa20.6■□□□□ 0.89
RPUSD4-207ENST00000532800 SPICE1Q8N0Z3 855 aa20.6■□□□□ 0.89
RPUSD4-207ENST00000532800 MAGEA10P43363 369 aaPredicted RBP20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 ATP2B2Q01814 1243 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 LRRC26Q2I0M4 334 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 C12orf60Q5U649 245 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 TRPV1Q8NER1 839 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 LRRCC1Q9C099 1032 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 SPATC1LQ9H0A9 340 aa20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 CHMP4BQ9H444 224 aaKnown RBP20.59■□□□□ 0.89
RPUSD4-207ENST00000532800 COL11A1P12107 1806 aaPredicted RBP20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 USP17L12C9JPN9 530 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 USP17L21D6R901 530 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 ADORA2AP29274 412 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 BMP8BP34820 402 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 CDK8P49336 464 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 UBE3CQ15386 1083 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 PUS7LQ9H0K6 701 aaKnown RBP20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 ARHGEF10LQ9HCE6 1279 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 HOXC10Q9NYD6 342 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 DDX20Q9UHI6 824 aaKnown RBP20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 TMX2Q9Y320 296 aa20.58■□□□□ 0.89
RPUSD4-207ENST00000532800 IGHA2P01877 340 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 ERCC3P19447 782 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 CNGA1P29973 690 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 DSG3P32926 999 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 SAMD1Q6SPF0 538 aaPredicted RBP20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 C16orf86Q6ZW13 317 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 LPAR1Q92633 364 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 ATG4CQ96DT6 458 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 VCPKMTQ9H867 229 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 SLC4A4Q9Y6R1 1079 aa20.57■□□□□ 0.88
RPUSD4-207ENST00000532800 FLOT1O75955 427 aa20.56■□□□□ 0.88
RPUSD4-207ENST00000532800 PLS1Q14651 629 aa20.56■□□□□ 0.88
RPUSD4-207ENST00000532800 DPP9Q86TI2 863 aa20.56■□□□□ 0.88
RPUSD4-207ENST00000532800 CCDC17Q96LX7 622 aa20.56■□□□□ 0.88
RPUSD4-207ENST00000532800 COBLO75128 1261 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 CYBAP13498 195 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 CTR9Q6PD62 1173 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 AMOTL1Q8IY63 956 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 SHCBP1Q8NEM2 672 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 SH2D4AQ9H788 454 aa20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 GREB1LQ9C091 1923 aaPredicted RBP20.55■□□□□ 0.88
RPUSD4-207ENST00000532800 COL6A3P12111 3177 aa20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 WDR46O15213 610 aaKnown RBP20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 EEF2P13639 858 aaKnown RBP20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 NCAPG2Q86XI2 1143 aa20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 MB21D1Q8N884 522 aa20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 DDRGK1Q96HY6 314 aa20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 SENP6Q9GZR1 1112 aaPredicted RBP20.54■□□□□ 0.88
RPUSD4-207ENST00000532800 ZNFX1Q9P2E3 1918 aaKnown RBP20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 STRNO43815 780 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 MSCO60682 206 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 ANO1Q5XXA6 986 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 TSHZ3Q63HK5 1081 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 OLFML2BQ68BL8 750 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 ZSCAN25Q6NSZ9 544 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 FBXO28Q9NVF7 368 aa20.53■□□□□ 0.88
RPUSD4-207ENST00000532800 TMEM132BQ14DG7 1078 aa20.52■□□□□ 0.88
RPUSD4-207ENST00000532800 TDHQ8IZJ6 230 aa20.52■□□□□ 0.88
RPUSD4-207ENST00000532800 UBE2OQ9C0C9 1292 aaKnown RBP20.52■□□□□ 0.88
RPUSD4-207ENST00000532800 DNM1LO00429 736 aa20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 ATN1P54259 1190 aaPredicted RBP20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 MDM2Q00987 491 aaPredicted RBP20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 STK11IPQ8N1F8 1099 aa20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 STRBPQ96SI9 672 aaKnown RBP20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.51■□□□□ 0.87
RPUSD4-207ENST00000532800 MROH8Q9H579 483 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms