RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 JAKMIP2Q96AA8 810 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 XDHP47989 1333 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 GTPBP6O43824 516 aaPredicted RBP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 OPA1O60313 960 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 ZBTB21Q9ULJ3 1066 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 VWDEQ8N2E2 1590 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 PHACTR2O75167 634 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 HOOK3Q86VS8 718 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 SYMPKQ92797 1274 aaKnown RBP17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 REREQ9P2R6 1566 aa17.11■□□□□ 0.33
PCDHA3-202ENST00000532566 WDHD1O75717 1129 aaPredicted RBP17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 MAP2K1Q02750 393 aaPredicted RBP17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 SPATA1Q5VX52 437 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 PAF1Q8N7H5 531 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 SLF1Q9BQI6 1058 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 TECPR2O15040 1411 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 MMP1P03956 469 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 TRAPPC10P48553 1259 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 PLS1Q14651 629 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 NEK8Q86SG6 692 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 BCL2L12Q9HB09 334 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 NRBP1Q9UHY1 535 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 STK24Q9Y6E0 443 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 CHMP2AO43633 222 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 OR52Z1P0C646 297 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 GOLGA8HP0CJ92 632 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 ETF1P62495 437 aaKnown RBP17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 DNM3Q9UQ16 869 aa17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.1■□□□□ 0.33
PCDHA3-202ENST00000532566 CDC25BP30305 580 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 ZRSR2Q15696 482 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 TRERF1Q96PN7 1200 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NT5C3AQ9H0P0 336 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 CSRNP2Q9H175 543 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 IKBKBO14920 756 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NBPF14Q5TI25 921 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NBPF10Q6P3W6 841 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 HDXQ7Z353 690 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NBPF15Q8N660 670 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 TCHPQ9BT92 498 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 LONP1P36776 959 aaKnown RBP17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 TNNC1P63316 161 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 GSDMAQ96QA5 445 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 IMPG2Q9BZV3 1241 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 CDHR2Q9BYE9 1310 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 PREX1Q8TCU6 1659 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 PXDNLA1KZ92 1463 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 KCNJ18B7U540 433 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 NR5A1Q13285 461 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 MORC3Q14149 939 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 KCNJ12Q14500 433 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 SLC9C1Q4G0N8 1177 aa17.09■□□□□ 0.33
PCDHA3-202ENST00000532566 MAGEA1P43355 309 aa17.08■□□□□ 0.33
PCDHA3-202ENST00000532566 OR8K1Q8NGG5 319 aa17.08■□□□□ 0.33
PCDHA3-202ENST00000532566 PKD2L1Q9P0L9 805 aa17.08■□□□□ 0.33
PCDHA3-202ENST00000532566 RASAL2Q9UJF2 1139 aa17.08■□□□□ 0.33
PCDHA3-202ENST00000532566 TRIM28Q13263 835 aaKnown RBP17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 SMC1AQ14683 1233 aaKnown RBP17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 A0A087WWV3 80 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 H7C1D1 291 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 USH1GQ495M9 461 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 STK32BQ9NY57 414 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 TSC1Q92574 1164 aa17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 SECISBP2LQ93073 1101 aaKnown RBP17.08■□□□□ 0.32
PCDHA3-202ENST00000532566 PALLDQ8WX93 1383 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 ERCC5P28715 1186 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 TECP42680 631 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 ZYXQ15942 572 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 SYNE4Q8N205 404 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 BBXQ8WY36 941 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 CALUO43852 315 aaPredicted RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 CAPN2P17655 700 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 KCNQ4P56696 695 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 SUPT20HQ8NEM7 779 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 IQCDQ96DY2 449 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 C1orf167Q5SNV9 1468 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 PDE6BP35913 854 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 FOXO4P98177 505 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 TSGA10IPQ3SY00 556 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 LONRF3Q496Y0 759 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 NELFCDQ8IXH7 590 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 LRRC47Q8N1G4 583 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 CACTINQ8WUQ7 758 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 THRAP3Q9Y2W1 955 aaKnown RBP17.07■□□□□ 0.32
PCDHA3-202ENST00000532566 PSDA5PKW4 1024 aaPredicted RBP17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 ARHGEF35A5YM69 484 aa17.06■□□□□ 0.32
PCDHA3-202ENST00000532566 ERCC3P19447 782 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms