RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ANO10Q9NW15 660 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 USP25Q9UHP3 1055 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 DAGLAQ9Y4D2 1042 aa14.13□□□□□ -0.15
CHD7-211ENST00000532149 USP17L3A6NCW0 530 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 USP17L4A6NCW7 530 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 SCG2P13521 617 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 CDK8P49336 464 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
CHD7-211ENST00000532149 PFKFB3Q16875 520 aaPredicted RBP14.12□□□□□ -0.15
CHD7-211ENST00000532149 USP17L1Q7RTZ2 530 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
CHD7-211ENST00000532149 FSIP1Q8NA03 581 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 PSMD1Q99460 953 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 SPZ1Q9BXG8 430 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 CCDC39Q9UFE4 941 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 SYNPO2Q9UMS6 1093 aa14.12□□□□□ -0.15
CHD7-211ENST00000532149 TTF2Q9UNY4 1162 aaKnown RBP14.12□□□□□ -0.15
CHD7-211ENST00000532149 MYH1P12882 1939 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 GOLGA6L6A8MZA4 724 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 MYO1BO43795 1136 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 NR1I2O75469 434 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 RASA1P20936 1047 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 TYRO3Q06418 890 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 KIAA2012Q0VF49 1180 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 SNW1Q13573 536 aaKnown RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 STX1AQ16623 288 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 DDX60LQ5H9U9 1706 aaKnown RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 RCSD1Q6JBY9 416 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 FOXP4Q8IVH2 680 aaPredicted RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 CCDC144CPQ8IYA2 1237 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 C7orf43Q8WVR3 580 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 MYL10Q9BUA6 226 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 IDI2Q9BXS1 227 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 SERPINB13Q9UIV8 391 aa14.11□□□□□ -0.15
CHD7-211ENST00000532149 V9GY48 417 aaPredicted RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 COL2A1P02458 1487 aaPredicted RBP14.11□□□□□ -0.15
CHD7-211ENST00000532149 CDK5RAP2Q96SN8 1893 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 COL11A2P13942 1736 aaPredicted RBP14.1□□□□□ -0.15
CHD7-211ENST00000532149 CYP2D7A0A087X1C5 515 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 TRIM75PA6NK02 468 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 RIMBP2O15034 1052 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 PRDM1O75626 825 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 RXRAP19793 462 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 PTPAQ15257 358 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 ASPRV1Q53RT3 343 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 CT47A1Q5JQC4 288 aaPredicted RBP14.1□□□□□ -0.15
CHD7-211ENST00000532149 MAPKAPK5Q8IW41 473 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 TTLL6Q8N841 843 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 DAGLBQ8NCG7 672 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 BPIFA3Q9BQP9 254 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 GLT8D2Q9H1C3 349 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 CLIC4Q9Y696 253 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 EP400Q96L91 3159 aa14.1□□□□□ -0.15
CHD7-211ENST00000532149 PALM3A6NDB9 673 aaPredicted RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 LAD1O00515 517 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 CEBPZQ03701 1054 aaKnown RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 GABPAQ06546 454 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 PDAP1Q13442 181 aaKnown RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 EZH2Q15910 746 aaKnown RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 PKN1Q16512 942 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 FAM47AQ5JRC9 791 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 AXDND1Q5T1B0 1012 aaPredicted RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 POTEAQ6S8J7 498 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 USP40Q9NVE5 1235 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 SRPRBQ9Y5M8 271 aaKnown RBP14.09□□□□□ -0.15
CHD7-211ENST00000532149 CNTNAP5Q8WYK1 1306 aa14.09□□□□□ -0.15
CHD7-211ENST00000532149 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 KIF28PB7ZC32 967 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 ENTPD3O75355 529 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 PARP1P09874 1014 aaKnown RBP14.08□□□□□ -0.16
CHD7-211ENST00000532149 PTPREP23469 700 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 GNA11P29992 359 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 SYKP43405 635 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 CRKP46108 304 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 PLCD1P51178 756 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 NLRP5P59047 1200 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 TGFB2P61812 414 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 TPM4P67936 248 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 TRAF1Q13077 416 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 GPATCH4Q5T3I0 446 aaKnown RBP14.08□□□□□ -0.16
CHD7-211ENST00000532149 RESP18Q5W5W9 173 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 ARL6IP4Q66PJ3 421 aaKnown RBP14.08□□□□□ -0.16
CHD7-211ENST00000532149 MCTP2Q6DN12 878 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.08□□□□□ -0.16
CHD7-211ENST00000532149 RAB11FIP4Q86YS3 637 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 CEP57L1Q8IYX8 460 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 NKX2-3Q8TAU0 364 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 OSBPL5Q9H0X9 879 aaPredicted RBP14.08□□□□□ -0.16
CHD7-211ENST00000532149 IL17RBQ9NRM6 502 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 PI4KBQ9UBF8 816 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 HDAC9Q9UKV0 1011 aa14.08□□□□□ -0.16
CHD7-211ENST00000532149 HPSEQ9Y251 543 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms