RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.04□□□□□ -0.64
NXF1-209ENST00000531474 KRT23Q9C075 422 aa11.04□□□□□ -0.64
NXF1-209ENST00000531474 CNNM2Q9H8M5 875 aa11.04□□□□□ -0.64
NXF1-209ENST00000531474 AS3MTQ9HBK9 375 aa11.04□□□□□ -0.64
NXF1-209ENST00000531474 ZDHHC9Q9Y397 364 aa11.04□□□□□ -0.64
NXF1-209ENST00000531474 DDX49Q9Y6V7 483 aaKnown RBP11.04□□□□□ -0.64
NXF1-209ENST00000531474 AOC2O75106 756 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 ZSCAN22P10073 491 aaPredicted RBP11.03□□□□□ -0.64
NXF1-209ENST00000531474 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
NXF1-209ENST00000531474 GJB2P29033 226 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 VEGFBP49765 207 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 EXOSC10Q01780 885 aaKnown RBP11.03□□□□□ -0.64
NXF1-209ENST00000531474 SPP2Q13103 211 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
NXF1-209ENST00000531474 CCDC83Q8IWF9 413 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 CEP95Q96GE4 821 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 AGXT2Q9BYV1 514 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 KANSL2Q9H9L4 492 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 ARHGEF10LQ9HCE6 1279 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 TPCN1Q9ULQ1 816 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 PLIN4Q96Q06 1357 aa11.03□□□□□ -0.64
NXF1-209ENST00000531474 IGKV6D-41A0A0C4DH26 115 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 GOLGA6L3A6NEY3 463 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 IRF6O14896 467 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.65
NXF1-209ENST00000531474 NMT2O60551 498 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 CPA1P15085 419 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 SYT1P21579 422 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 MCM5P33992 734 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 GTF2A2P52657 109 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
NXF1-209ENST00000531474 NOGQ13253 232 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 SNAPC2Q13487 334 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 MTMR2Q13614 643 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 LARP1BQ659C4 914 aaKnown RBP11.02□□□□□ -0.65
NXF1-209ENST00000531474 Q6ZUG5 572 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 RGS22Q8NE09 1264 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 NCOA7Q8NI08 942 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 ACER1Q8TDN7 264 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 WDR18Q9BV38 432 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 LMBRD1Q9NUN5 540 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 AFG3L2Q9Y4W6 797 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 ATAD5Q96QE3 1844 aa11.02□□□□□ -0.65
NXF1-209ENST00000531474 CCL15-CCL14A0A0B4J2E2 113 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 MANSC4A6NHS7 340 aaPredicted RBP11.01□□□□□ -0.65
NXF1-209ENST00000531474 CXCL11O14625 94 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 PFKFB2O60825 505 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 CETPP11597 493 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 EEF2P13639 858 aaKnown RBP11.01□□□□□ -0.65
NXF1-209ENST00000531474 NT5C2P49902 561 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 KIF23Q02241 960 aaPredicted RBP11.01□□□□□ -0.65
NXF1-209ENST00000531474 PKP1Q13835 747 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 ZYXQ15942 572 aaKnown RBP11.01□□□□□ -0.65
NXF1-209ENST00000531474 CCL15Q16663 113 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 CYB5R4Q7L1T6 521 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 IQCA1Q86XH1 822 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 SYAP1Q96A49 352 aaPredicted RBP11.01□□□□□ -0.65
NXF1-209ENST00000531474 ZIC5Q96T25 663 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 ZKSCAN3Q9BRR0 538 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 UBAC1Q9BSL1 405 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 SH2D4AQ9H788 454 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 IL17RBQ9NRM6 502 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 MTMR4Q9NYA4 1195 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 CLIP2Q9UDT6 1046 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 STX8Q9UNK0 236 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 KCNH4Q9UQ05 1017 aa11.01□□□□□ -0.65
NXF1-209ENST00000531474 MYH8P13535 1937 aa11□□□□□ -0.65
NXF1-209ENST00000531474 A0A0G2JLL6 359 aaPredicted RBP11□□□□□ -0.65
NXF1-209ENST00000531474 A0A1W2PRG0 241 aa11□□□□□ -0.65
NXF1-209ENST00000531474 USP17L10C9JJH3 530 aa11□□□□□ -0.65
NXF1-209ENST00000531474 RAD21O60216 631 aa11□□□□□ -0.65
NXF1-209ENST00000531474 PRPF40AO75400 957 aaKnown RBP11□□□□□ -0.65
NXF1-209ENST00000531474 TTLL1O95922 423 aa11□□□□□ -0.65
NXF1-209ENST00000531474 HMGCS2P54868 508 aa11□□□□□ -0.65
NXF1-209ENST00000531474 BACE1P56817 501 aa11□□□□□ -0.65
NXF1-209ENST00000531474 EVCP57679 992 aa11□□□□□ -0.65
NXF1-209ENST00000531474 SREBF2Q12772 1141 aa11□□□□□ -0.65
NXF1-209ENST00000531474 DGKZQ13574 1117 aa11□□□□□ -0.65
NXF1-209ENST00000531474 PPP4R3BQ5MIZ7 849 aa11□□□□□ -0.65
NXF1-209ENST00000531474 GADL1Q6ZQY3 521 aa11□□□□□ -0.65
NXF1-209ENST00000531474 PRRT2Q7Z6L0 340 aaPredicted RBP11□□□□□ -0.65
NXF1-209ENST00000531474 SIAH1Q8IUQ4 282 aa11□□□□□ -0.65
NXF1-209ENST00000531474 MB21D2Q8IYB1 491 aaPredicted RBP11□□□□□ -0.65
NXF1-209ENST00000531474 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
NXF1-209ENST00000531474 GTF3C6Q969F1 213 aa11□□□□□ -0.65
NXF1-209ENST00000531474 ZSCAN10Q96SZ4 725 aaPredicted RBP11□□□□□ -0.65
NXF1-209ENST00000531474 MTA3Q9BTC8 594 aa11□□□□□ -0.65
NXF1-209ENST00000531474 KIAA1683Q9H0B3 1180 aa11□□□□□ -0.65
NXF1-209ENST00000531474 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
NXF1-209ENST00000531474 TMOD4Q9NZQ9 345 aa11□□□□□ -0.65
NXF1-209ENST00000531474 ZSWIM5Q9P217 1185 aa11□□□□□ -0.65
NXF1-209ENST00000531474 NYAP2Q9P242 653 aa11□□□□□ -0.65
NXF1-209ENST00000531474 C19orf81C9J6K1 198 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 PRC1O43663 620 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
NXF1-209ENST00000531474 F13A1P00488 732 aa10.99□□□□□ -0.65
NXF1-209ENST00000531474 MAP2K2P36507 400 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms