RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.07
TM9SF1-211ENST00000531406 SIAH1Q8IUQ4 282 aa15.46■□□□□ 0.07
TM9SF1-211ENST00000531406 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.46■□□□□ 0.07
TM9SF1-211ENST00000531406 IVNS1ABPQ9Y6Y0 642 aa15.46■□□□□ 0.07
TM9SF1-211ENST00000531406 DOCK3Q8IZD9 2030 aa15.46■□□□□ 0.07
TM9SF1-211ENST00000531406 CHGBP05060 677 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 ATP2B2Q01814 1243 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 GRB14Q14449 540 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 KIAA1755Q5JYT7 1200 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 MOV10L1Q9BXT6 1211 aaKnown RBP15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 DDX60LQ5H9U9 1706 aaKnown RBP15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 MYH1P12882 1939 aa15.45■□□□□ 0.06
TM9SF1-211ENST00000531406 CYP2D7A0A087X1C5 515 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 SOX1O00570 391 aaPredicted RBP15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 AKR1B1P15121 316 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 SYN1P17600 705 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 UBE3CQ15386 1083 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 C20orf194Q5TEA3 1177 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 C12orf60Q5U649 245 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 CLEC10AQ8IUN9 316 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 NPLOC4Q8TAT6 608 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
TM9SF1-211ENST00000531406 USP17L12C9JPN9 530 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 USP17L21D6R901 530 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 SMIM22K7EJ46 135 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 STRNO43815 780 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 IGHA2P01877 340 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 DSG3P32926 999 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 CYP2C19P33261 490 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 CDK8P49336 464 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 ICA1Q05084 483 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 SHCBP1Q8NEM2 672 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 LPAR1Q92633 364 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 LRCH3Q96II8 777 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 CCDC17Q96LX7 622 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 LRRCC1Q9C099 1032 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 SPATC1LQ9H0A9 340 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 SH2D4AQ9H788 454 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 ARHGEF10LQ9HCE6 1279 aa15.43■□□□□ 0.06
TM9SF1-211ENST00000531406 SZT2Q5T011 3432 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 CNGA1P29973 690 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 MAGEA10P43363 369 aaPredicted RBP15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 LRRC26Q2I0M4 334 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 DPP9Q86TI2 863 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 AMOTL1Q8IY63 956 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 SPICE1Q8N0Z3 855 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 MB21D1Q8N884 522 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 TRPV1Q8NER1 839 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 DDRGK1Q96HY6 314 aa15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 DDX20Q9UHI6 824 aaKnown RBP15.42■□□□□ 0.06
TM9SF1-211ENST00000531406 SMARCA5O60264 1052 aaPredicted RBP15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 MSCO60682 206 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 FLOT1O75955 427 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 ERCC3P19447 782 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 ADORA2AP29274 412 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 OLFML2BQ68BL8 750 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 ZSCAN25Q6NSZ9 544 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 C16orf86Q6ZW13 317 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 ATG4CQ96DT6 458 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 PUS7LQ9H0K6 701 aaKnown RBP15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 SLC4A4Q9Y6R1 1079 aa15.41■□□□□ 0.06
TM9SF1-211ENST00000531406 COBLO75128 1261 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 PLS1Q14651 629 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 CTR9Q6PD62 1173 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 MROH8Q9H579 483 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 ECHDC1Q9NTX5 307 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 NAV1Q8NEY1 1877 aa15.4■□□□□ 0.06
TM9SF1-211ENST00000531406 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 CYBAP13498 195 aa15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 EEF2P13639 858 aaKnown RBP15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 SAMD1Q6SPF0 538 aaPredicted RBP15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 NCAPG2Q86XI2 1143 aa15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 ABRAQ8N0Z2 381 aa15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 UBE2OQ9C0C9 1292 aaKnown RBP15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 SENP6Q9GZR1 1112 aaPredicted RBP15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 KANSL2Q9H9L4 492 aa15.39■□□□□ 0.05
TM9SF1-211ENST00000531406 TMEM132BQ14DG7 1078 aa15.38■□□□□ 0.05
TM9SF1-211ENST00000531406 TDHQ8IZJ6 230 aa15.38■□□□□ 0.05
TM9SF1-211ENST00000531406 STRBPQ96SI9 672 aaKnown RBP15.38■□□□□ 0.05
TM9SF1-211ENST00000531406 SLC5A4Q9NY91 659 aa15.38■□□□□ 0.05
TM9SF1-211ENST00000531406 ADAMTS5Q9UNA0 930 aa15.38■□□□□ 0.05
TM9SF1-211ENST00000531406 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 DNM1LO00429 736 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 SLC25A27O95847 323 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 LRIT3Q3SXY7 679 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 FBXO28Q9NVF7 368 aa15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 ARPP21Q9UBL0 812 aaPredicted RBP15.37■□□□□ 0.05
TM9SF1-211ENST00000531406 GSG1L2A8MUP6 293 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 SEPT4O43236 478 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 FCER1AP12319 257 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 SBK1Q52WX2 424 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 PRAMEF19Q5SWL8 479 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 GJC2Q5T442 439 aaPredicted RBP15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 GPR153Q6NV75 609 aa15.36■□□□□ 0.05
TM9SF1-211ENST00000531406 GIMAP6Q6P9H5 292 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms