RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 DPP9Q86TI2 863 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 CLEC10AQ8IUN9 316 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 DYNLL2Q96FJ2 89 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 BOLA2Q9H3K6 86 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 SH2D4AQ9H788 454 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 ARHGEF10LQ9HCE6 1279 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 SWAP70Q9UH65 585 aa19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 DDX20Q9UHI6 824 aaKnown RBP19.09■□□□□ 0.65
CHMP4A-204ENST00000530996 A0A1W2PRG0 241 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 TCRBV5S4A2TA0A5A2 114 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 RAB11FIP3O75154 756 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 CYP2C19P33261 490 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 BMP8BP34820 402 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 LHX8Q68G74 356 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 TDHQ8IZJ6 230 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 SPICE1Q8N0Z3 855 aa19.08■□□□□ 0.64
CHMP4A-204ENST00000530996 PRKAB2O43741 272 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 RAD21O60216 631 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 MSCO60682 206 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 FLOT1O75955 427 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 MYCNP04198 464 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 COL6A1P12109 1028 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 ADORA2AP29274 412 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 COG2Q14746 738 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 NPLOC4Q8TAT6 608 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 MOV10L1Q9BXT6 1211 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 SENP6Q9GZR1 1112 aaPredicted RBP19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 HOXC10Q9NYD6 342 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 LAMA3Q16787 3333 aa19.07■□□□□ 0.64
CHMP4A-204ENST00000530996 AKR1B1P15121 316 aa19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 ADD2P35612 726 aa19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 ATN1P54259 1190 aaPredicted RBP19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 MDM2Q00987 491 aaPredicted RBP19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 SLFNL1Q499Z3 407 aa19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 NCAPG2Q86XI2 1143 aa19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 SPATC1LQ9H0A9 340 aa19.06■□□□□ 0.64
CHMP4A-204ENST00000530996 HOXC6P09630 235 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 ERCC3P19447 782 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 SIRT2Q8IXJ6 389 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 DEFB123Q8N688 67 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 MB21D1Q8N884 522 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 LPAR1Q92633 364 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 ATP8A2Q9NTI2 1148 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 ZBTB40Q9NUA8 1239 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 SLC5A4Q9NY91 659 aa19.05■□□□□ 0.64
CHMP4A-204ENST00000530996 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
CHMP4A-204ENST00000530996 SLC17A8Q8NDX2 589 aa19.04■□□□□ 0.64
CHMP4A-204ENST00000530996 ATG4CQ96DT6 458 aa19.04■□□□□ 0.64
CHMP4A-204ENST00000530996 LBHD1Q9BQE6 289 aaPredicted RBP19.04■□□□□ 0.64
CHMP4A-204ENST00000530996 PRKAG2Q9UGJ0 569 aa19.04■□□□□ 0.64
CHMP4A-204ENST00000530996 KBTBD13C9JR72 458 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 STRNO43815 780 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 CYBAP13498 195 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 ATP5JP18859 108 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 KIAA1755Q5JYT7 1200 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 ANO1Q5XXA6 986 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 OLFML2BQ68BL8 750 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 SHCBP1Q8NEM2 672 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 HAUS7Q99871 368 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 SLC4A4Q9Y6R1 1079 aa19.03■□□□□ 0.64
CHMP4A-204ENST00000530996 DNM1LO00429 736 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 WDR46O15213 610 aaKnown RBP19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 DSG3P32926 999 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 CDK8P49336 464 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 GJC2Q5T442 439 aaPredicted RBP19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 ZSCAN25Q6NSZ9 544 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 Q7L0L9 218 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 TRPV1Q8NER1 839 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 CCDC17Q96LX7 622 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 LRRCC1Q9C099 1032 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 ATP11BQ9Y2G3 1177 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 TMX2Q9Y320 296 aa19.02■□□□□ 0.64
CHMP4A-204ENST00000530996 A0A0G2JMZ2 1700 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 USP17L12C9JPN9 530 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 USP17L21D6R901 530 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 CHGBP05060 677 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 LRIT3Q3SXY7 679 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 C16orf86Q6ZW13 317 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 MROH8Q9H579 483 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 GOPCQ9HD26 462 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 ZNF236Q9UL36 1845 aa19.01■□□□□ 0.63
CHMP4A-204ENST00000530996 FCER1AP12319 257 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 RTP1P59025 263 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 UBE3CQ15386 1083 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 C12orf60Q5U649 245 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 ARRDC4Q8NCT1 418 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 PRDM5Q9NQX1 630 aaPredicted RBP19■□□□□ 0.63
CHMP4A-204ENST00000530996 FRMPD3Q5JV73 1810 aa19■□□□□ 0.63
CHMP4A-204ENST00000530996 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 SMARCA5O60264 1052 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 COBLO75128 1261 aa18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 EEF2P13639 858 aaKnown RBP18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 GPR153Q6NV75 609 aa18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 STK11IPQ8N1F8 1099 aa18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 ARPP21Q9UBL0 812 aaPredicted RBP18.99■□□□□ 0.63
CHMP4A-204ENST00000530996 SEPT4O43236 478 aa18.98■□□□□ 0.63
CHMP4A-204ENST00000530996 SLC25A27O95847 323 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms