RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TTC14Q96N46 770 aa18.04■□□□□ 0.48
CCS-206ENST00000530961 IL17RBQ9NRM6 502 aa18.04■□□□□ 0.48
CCS-206ENST00000530961 CLIP2Q9UDT6 1046 aa18.04■□□□□ 0.48
CCS-206ENST00000530961 FOCADQ5VW36 1801 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 B4E1Z4 1266 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 E7EWF7 191 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 KDM4AO75164 1064 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
CCS-206ENST00000530961 HOXA7P31268 230 aaPredicted RBP18.03■□□□□ 0.48
CCS-206ENST00000530961 FBXO46Q6PJ61 603 aaPredicted RBP18.03■□□□□ 0.48
CCS-206ENST00000530961 RALYLQ86SE5 291 aaKnown RBP18.03■□□□□ 0.48
CCS-206ENST00000530961 CLEC10AQ8IUN9 316 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 NCOA7Q8NI08 942 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 VCPKMTQ9H867 229 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 ZFYVE28Q9HCC9 887 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 GOPCQ9HD26 462 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 ZSWIM5Q9P217 1185 aa18.03■□□□□ 0.48
CCS-206ENST00000530961 ZYXQ15942 572 aaKnown RBP18.02■□□□□ 0.48
CCS-206ENST00000530961 TSGA10IPQ3SY00 556 aa18.02■□□□□ 0.48
CCS-206ENST00000530961 TREML2Q5T2D2 321 aa18.02■□□□□ 0.48
CCS-206ENST00000530961 NAV1Q8NEY1 1877 aa18.02■□□□□ 0.48
CCS-206ENST00000530961 PARK7Q99497 189 aaKnown RBP18.02■□□□□ 0.48
CCS-206ENST00000530961 PNMA3Q9UL41 463 aa18.02■□□□□ 0.48
CCS-206ENST00000530961 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
CCS-206ENST00000530961 SIPA1L1O43166 1804 aa18.02■□□□□ 0.47
CCS-206ENST00000530961 OSBPP22059 807 aa18.01■□□□□ 0.47
CCS-206ENST00000530961 TAF1CQ15572 869 aaPredicted RBP18.01■□□□□ 0.47
CCS-206ENST00000530961 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
CCS-206ENST00000530961 DGKHQ86XP1 1220 aa18.01■□□□□ 0.47
CCS-206ENST00000530961 TRIOBPQ9H2D6 2365 aa18.01■□□□□ 0.47
CCS-206ENST00000530961 USP17L15C9J2P7 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L13C9JLJ4 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L11C9JVI0 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L18D6R9N7 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L22D6RA61 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L17D6RBQ6 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L19D6RCP7 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L20D6RJB6 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 F5H6K3 240 aa18■□□□□ 0.47
CCS-206ENST00000530961 NMT2O60551 498 aa18■□□□□ 0.47
CCS-206ENST00000530961 VCAM1P19320 739 aa18■□□□□ 0.47
CCS-206ENST00000530961 HSPA4P34932 840 aa18■□□□□ 0.47
CCS-206ENST00000530961 KLRC3Q07444 240 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP17L24Q0WX57 530 aa18■□□□□ 0.47
CCS-206ENST00000530961 CRHR2Q13324 411 aa18■□□□□ 0.47
CCS-206ENST00000530961 KRT32Q14532 448 aa18■□□□□ 0.47
CCS-206ENST00000530961 GMCL1P1Q8NEA9 526 aa18■□□□□ 0.47
CCS-206ENST00000530961 ANKS1AQ92625 1134 aa18■□□□□ 0.47
CCS-206ENST00000530961 KCNB2Q92953 911 aa18■□□□□ 0.47
CCS-206ENST00000530961 ZSCAN10Q96SZ4 725 aaPredicted RBP18■□□□□ 0.47
CCS-206ENST00000530961 UBAC1Q9BSL1 405 aa18■□□□□ 0.47
CCS-206ENST00000530961 USP26Q9BXU7 913 aa18■□□□□ 0.47
CCS-206ENST00000530961 TAF6LQ9Y6J9 622 aa18■□□□□ 0.47
CCS-206ENST00000530961 WDR46O15213 610 aaKnown RBP17.99■□□□□ 0.47
CCS-206ENST00000530961 TLR2O60603 784 aa17.99■□□□□ 0.47
CCS-206ENST00000530961 TBC1D8O95759 1140 aa17.99■□□□□ 0.47
CCS-206ENST00000530961 TOP1P11387 765 aaKnown RBP17.99■□□□□ 0.47
CCS-206ENST00000530961 MCCP23508 829 aa17.99■□□□□ 0.47
CCS-206ENST00000530961 IRX3P78415 501 aaPredicted RBP17.99■□□□□ 0.47
CCS-206ENST00000530961 STOX1Q6ZVD7 989 aa17.99■□□□□ 0.47
CCS-206ENST00000530961 MKI67P46013 3256 aaKnown RBP17.99■□□□□ 0.47
CCS-206ENST00000530961 MYH1P12882 1939 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 SZT2Q5T011 3432 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
CCS-206ENST00000530961 CATSPERGQ6ZRH7 1159 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 SPICE1Q8N0Z3 855 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 NKX2-3Q8TAU0 364 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 SMCR8Q8TEV9 937 aaPredicted RBP17.98■□□□□ 0.47
CCS-206ENST00000530961 MTA3Q9BTC8 594 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 ASCC2Q9H1I8 757 aaPredicted RBP17.98■□□□□ 0.47
CCS-206ENST00000530961 RPAP3Q9H6T3 665 aaPredicted RBP17.98■□□□□ 0.47
CCS-206ENST00000530961 CDK5RAP2Q96SN8 1893 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 AK9Q5TCS8 1911 aa17.98■□□□□ 0.47
CCS-206ENST00000530961 ERICH2A1L162 156 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 RAD21O60216 631 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 NDUFB10O96000 172 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 CYP2C8P10632 490 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 MCM5P33992 734 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 GCLCP48506 637 aaPredicted RBP17.97■□□□□ 0.47
CCS-206ENST00000530961 KIAA1755Q5JYT7 1200 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 RCSD1Q6JBY9 416 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 MB21D2Q8IYB1 491 aaPredicted RBP17.97■□□□□ 0.47
CCS-206ENST00000530961 RASEFQ8IZ41 740 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 LRRC47Q8N1G4 583 aaKnown RBP17.97■□□□□ 0.47
CCS-206ENST00000530961 GTF3C2Q8WUA4 911 aaPredicted RBP17.97■□□□□ 0.47
CCS-206ENST00000530961 NEK1Q96PY6 1258 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 TMEM47Q9BQJ4 181 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 ZKSCAN3Q9BRR0 538 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 HOXC10Q9NYD6 342 aa17.97■□□□□ 0.47
CCS-206ENST00000530961 GPR25O00155 361 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 HMGB1P09429 215 aaKnown RBP17.96■□□□□ 0.47
CCS-206ENST00000530961 COG2Q14746 738 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 SLFN13Q68D06 897 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
CCS-206ENST00000530961 ZNF296Q8WUU4 475 aaPredicted RBP17.96■□□□□ 0.47
CCS-206ENST00000530961 GMCL1Q96IK5 515 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 R3HDMLQ9H3Y0 253 aa17.96■□□□□ 0.47
CCS-206ENST00000530961 OTOFQ9HC10 1997 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms