RNA–Protein interactions for RNA: ENST00000530875.5

NXF1-207, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best)

Gene NXF1, Length 1,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-207ENST00000530875 PTPDC1A2A3K4 754 aa16.25■□□□□ 0.19
NXF1-207ENST00000530875 ASNSP08243 561 aa16.25■□□□□ 0.19
NXF1-207ENST00000530875 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
NXF1-207ENST00000530875 CTCFLQ8NI51 663 aaPredicted RBP16.25■□□□□ 0.19
NXF1-207ENST00000530875 SMARCC2Q8TAQ2 1214 aa16.25■□□□□ 0.19
NXF1-207ENST00000530875 DDX11Q96FC9 970 aa16.25■□□□□ 0.19
NXF1-207ENST00000530875 ZNF112Q9UJU3 913 aa16.25■□□□□ 0.19
NXF1-207ENST00000530875 CCDC196A0A1B0GTZ2 297 aa16.24■□□□□ 0.19
NXF1-207ENST00000530875 MCM4P33991 863 aa16.24■□□□□ 0.19
NXF1-207ENST00000530875 NTRK3Q16288 839 aa16.24■□□□□ 0.19
NXF1-207ENST00000530875 CCDC84Q86UT8 332 aaPredicted RBP16.24■□□□□ 0.19
NXF1-207ENST00000530875 ZKSCAN4Q969J2 545 aaPredicted RBP16.24■□□□□ 0.19
NXF1-207ENST00000530875 MKL1Q969V6 931 aa16.24■□□□□ 0.19
NXF1-207ENST00000530875 KLRG1Q96E93 195 aa16.24■□□□□ 0.19
NXF1-207ENST00000530875 USP2O75604 605 aaPredicted RBP16.23■□□□□ 0.19
NXF1-207ENST00000530875 GRM4Q14833 912 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 PPP2R5BQ15173 497 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
NXF1-207ENST00000530875 PHKBQ93100 1093 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 RBM28Q9NW13 759 aaKnown RBP16.23■□□□□ 0.19
NXF1-207ENST00000530875 A0A1W2PRG0 241 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 USP17L5A8MUK1 530 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 PLEKHA8P1O95397 391 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 KIF5BP33176 963 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 LDHDQ86WU2 507 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 STAG2Q8N3U4 1231 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 CCDC82Q8N4S0 544 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 ACER1Q8TDN7 264 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 MAP3K14Q99558 947 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 ARHGEF10LQ9HCE6 1279 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 MAD2L2Q9UI95 211 aa16.23■□□□□ 0.19
NXF1-207ENST00000530875 TRAF5O00463 557 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 RAD21O60216 631 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 CDKL5O76039 1030 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 GOLGA8HP0CJ92 632 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 PDHBP11177 359 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 NF2P35240 595 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 ECE1P42892 770 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 USP17L2Q6R6M4 530 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 TMTC3Q6ZXV5 915 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 SCYL3Q8IZE3 742 aa16.22■□□□□ 0.19
NXF1-207ENST00000530875 PPP1R12BO60237 982 aaPredicted RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 FDPSP14324 419 aaKnown RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 IFNAR1P17181 557 aa16.21■□□□□ 0.19
NXF1-207ENST00000530875 HMGN5P82970 282 aaKnown RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.19
NXF1-207ENST00000530875 GINM1Q9NU53 330 aa16.21■□□□□ 0.19
NXF1-207ENST00000530875 FRMPD2Q68DX3 1309 aaPredicted RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 PALM3A6NDB9 673 aaPredicted RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 PARP1P09874 1014 aaKnown RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 FMR1Q06787 632 aaKnown RBP eCLIP16.21■□□□□ 0.19
NXF1-207ENST00000530875 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
NXF1-207ENST00000530875 PICK1Q9NRD5 415 aa16.21■□□□□ 0.19
NXF1-207ENST00000530875 ORC3Q9UBD5 711 aaPredicted RBP16.21■□□□□ 0.19
NXF1-207ENST00000530875 TMX2Q9Y320 296 aa16.21■□□□□ 0.19
NXF1-207ENST00000530875 MYH4Q9Y623 1939 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 F5H6K3 240 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 SNHG28P0DPA3 235 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 KLRC3Q07444 240 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 FUT2Q10981 343 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 PKP1Q13835 747 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 SLFN13Q68D06 897 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 NBPF11Q86T75 865 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 SLC26A6Q9BXS9 759 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 ATAD5Q96QE3 1844 aa16.2■□□□□ 0.18
NXF1-207ENST00000530875 UBE2Q2LH0YL09 131 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 MAP3K9P80192 1104 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 SSRP1Q08945 709 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 TTLL12Q14166 644 aaPredicted RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 MOB2Q70IA6 237 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 KLRF2D3W0D1 207 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 NDUFB10O96000 172 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 PTPRAP18433 802 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 SYT1P21579 422 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 IREB2P48200 963 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 VGLL4Q14135 290 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 ZYXQ15942 572 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 NOL9Q5SY16 702 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 LARP1BQ659C4 914 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 TNPO1Q92973 898 aaKnown RBP16.19■□□□□ 0.18
NXF1-207ENST00000530875 CPVLQ9H3G5 476 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 GPCPD1Q9NPB8 672 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 SYNPO2Q9UMS6 1093 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 DOCK1Q14185 1865 aa16.19■□□□□ 0.18
NXF1-207ENST00000530875 CNTNAP5Q8WYK1 1306 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 SLC1A4P43007 532 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 GNAQP50148 359 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 FOSBP53539 338 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 ZNF543Q08ER8 600 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 ASPRV1Q53RT3 343 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 KIAA1755Q5JYT7 1200 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 KCTD1Q719H9 257 aa16.18■□□□□ 0.18
NXF1-207ENST00000530875 TRIM22Q8IYM9 498 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms