RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 PRR36Q9H6K5 1346 aa5.9□□□□□ -1.47
PTPRC-214ENST00000530727 UPK3BL1B0FP48 263 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 FAM155AB1AL88 458 aaPredicted RBP5.89□□□□□ -1.47
PTPRC-214ENST00000530727 UPK3BL2E5RIL1 263 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 MLECQ14165 292 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 SPACA3Q8IXA5 215 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 BRMS1Q9HCU9 246 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 PAK6Q9NQU5 681 aaPredicted RBP5.89□□□□□ -1.47
PTPRC-214ENST00000530727 LRRC9Q6ZRR7 1453 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 SCAMP3O14828 347 aaKnown RBP5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CBX7O95931 251 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CANXP27824 592 aaKnown RBP5.89□□□□□ -1.47
PTPRC-214ENST00000530727 ETV3P41162 512 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CRKP46108 304 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 IRAK1P51617 712 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 APOBRQ0VD83 1088 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 KIAA0825Q8IV33 1275 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 ABI1Q8IZP0 508 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 MFSD4AQ8N468 514 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CYB5D2Q8WUJ1 264 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 SPON2Q9BUD6 331 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 TNKS2Q9H2K2 1166 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CWC22Q9HCG8 908 aaKnown RBP5.89□□□□□ -1.47
PTPRC-214ENST00000530727 UBP1Q9NZI7 540 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 PCDHB14Q9Y5E9 798 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 SNX11Q9Y5W9 270 aa5.89□□□□□ -1.47
PTPRC-214ENST00000530727 CNTNAP4Q9C0A0 1308 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 PRR33A8MZF0 331 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 TCF3P15923 654 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 NKPD1Q17RQ9 610 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 SEZ6Q53EL9 994 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 ZNF394Q53GI3 561 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 COX4I2Q96KJ9 171 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 SPATA32Q96LK8 384 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 PCDHGB7Q9Y5F8 929 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 HECW1Q76N89 1606 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 RAPGEF6Q8TEU7 1601 aa5.88□□□□□ -1.47
PTPRC-214ENST00000530727 ZNF865P0CJ78 1059 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CD8BP10966 210 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 MCM4P33991 863 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CD96P40200 585 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CLCN7P51798 805 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 PLCL1Q15111 1095 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 C22orf34Q6ZV56 151 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 SPRED2Q7Z698 418 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 SLFN12Q8IYM2 578 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 PHACTR4Q8IZ21 702 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CEP131Q9UPN4 1083 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 PRG4Q92954 1404 aaPredicted RBP5.87□□□□□ -1.47
PTPRC-214ENST00000530727 ABCA8O94911 1581 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 ERCC6L2Q5T890 1561 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 EPRSP07814 1512 aaKnown RBP5.87□□□□□ -1.47
PTPRC-214ENST00000530727 NUP153P49790 1475 aaKnown RBP5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CHURC1-FNTBB4DL54 471 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 KIR3DL1P43629 444 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 TNNI2P48788 182 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CDKAL1Q5VV42 579 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 DNAJB8Q8NHS0 232 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 ASB11Q8WXH4 323 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 NKD1Q969G9 470 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 NT5C1AQ9BXI3 368 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 MAGI3Q5TCQ9 1506 aa5.87□□□□□ -1.47
PTPRC-214ENST00000530727 CCDC18Q5T9S5 1454 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 ANGEL2Q5VTE6 544 aaKnown RBP5.86□□□□□ -1.47
PTPRC-214ENST00000530727 GK5Q6ZS86 529 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 WFDC3Q8IUB2 231 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 SREK1Q8WXA9 508 aaKnown RBP5.86□□□□□ -1.47
PTPRC-214ENST00000530727 CAPN6Q9Y6Q1 641 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 PLB1Q6P1J6 1458 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 RRBP1Q9P2E9 1410 aaKnown RBP5.86□□□□□ -1.47
PTPRC-214ENST00000530727 ARHGEF11O15085 1522 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 DNAJA2O60884 412 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 ZNF165P49910 485 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 CHMP4BP1P59074 171 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 IKZF1Q13422 519 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 PPP1R13LQ8WUF5 828 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 EAF1Q96JC9 268 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-214ENST00000530727 CCDC74BQ96LY2 380 aa5.86□□□□□ -1.47
PTPRC-214ENST00000530727 PPP1R1BQ9UD71 204 aaPredicted RBP5.86□□□□□ -1.47
PTPRC-214ENST00000530727 ATE1O95260 518 aa5.85□□□□□ -1.47
PTPRC-214ENST00000530727 HSPA12BQ96MM6 686 aa5.85□□□□□ -1.47
PTPRC-214ENST00000530727 GMIPQ9P107 970 aa5.85□□□□□ -1.47
PTPRC-214ENST00000530727 ADGRE2Q9UHX3 823 aa5.85□□□□□ -1.47
PTPRC-214ENST00000530727 PITPNM2Q9BZ72 1349 aa5.85□□□□□ -1.47
PTPRC-214ENST00000530727 CDK13Q14004 1512 aaKnown RBP5.85□□□□□ -1.47
PTPRC-214ENST00000530727 H3BS24 57 aa5.84□□□□□ -1.47
PTPRC-214ENST00000530727 FUT4P22083 530 aa5.84□□□□□ -1.47
PTPRC-214ENST00000530727 ARSHQ5FYA8 562 aa5.84□□□□□ -1.47
PTPRC-214ENST00000530727 SLITRK4Q8IW52 837 aa5.84□□□□□ -1.47
PTPRC-214ENST00000530727 REXO1Q8N1G1 1221 aaKnown RBP5.84□□□□□ -1.47
PTPRC-214ENST00000530727 BAHD1Q8TBE0 780 aaPredicted RBP5.84□□□□□ -1.47
PTPRC-214ENST00000530727 EHMT1Q9H9B1 1298 aa5.84□□□□□ -1.47
PTPRC-214ENST00000530727 DDX41Q9UJV9 622 aaKnown RBP5.84□□□□□ -1.47
PTPRC-214ENST00000530727 PHLDB1Q86UU1 1377 aa5.84□□□□□ -1.48
PTPRC-214ENST00000530727 SLC22A31A6NKX4 558 aa5.84□□□□□ -1.48
PTPRC-214ENST00000530727 RAG1P15918 1043 aa5.84□□□□□ -1.48
PTPRC-214ENST00000530727 GBP1P32455 592 aa5.84□□□□□ -1.48
PTPRC-214ENST00000530727 RACK1P63244 317 aaKnown RBP5.84□□□□□ -1.48
PTPRC-214ENST00000530727 CLCQ05315 142 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms