RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 LIG3P49916 1009 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 FNDC3BQ53EP0 1204 aaKnown RBP9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 FBXW10Q5XX13 1052 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 MMS22LQ6ZRQ5 1243 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 DAAM2Q86T65 1068 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 C11orf74Q86VG3 221 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 FAM43AQ8N2R8 423 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 MNS1Q8NEH6 495 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 SPATA9Q9BWV2 254 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 FBRSQ9HAH7 460 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 PPP4R2Q9NY27 417 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 C9orf78Q9NZ63 289 aaPredicted RBP9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 IP6K2Q9UHH9 426 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 IPPQ9Y573 584 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
SCARNA9-201ENST00000530422 TTLL8A6PVC2 850 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 PHACTR2O75167 634 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 KIF20AO95235 890 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 IPO7O95373 1038 aaKnown RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 ZNF280AP59817 542 aaPredicted RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 PUM3Q15397 648 aaKnown RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 ARMC3Q5W041 872 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 TSHZ3Q63HK5 1081 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 IFNL2Q8IZJ0 200 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 ZBTB38Q8NAP3 1195 aaPredicted RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 RBBP8NLQ8NC74 664 aaPredicted RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 GLIS3Q8NEA6 775 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 PI4K2BQ8TCG2 481 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 SERINC2Q96SA4 455 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 PUS7LQ9H0K6 701 aaKnown RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 NCOA5Q9HCD5 579 aaKnown RBP9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 PGPEP1Q9NXJ5 209 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 MKL2Q9ULH7 1088 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 HCN4Q9Y3Q4 1203 aa9.37□□□□□ -0.91
SCARNA9-201ENST00000530422 B2RBV5 119 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 CDK2AP1O14519 115 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 PLD2O14939 933 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 GPR39O43194 453 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 ADCY3O60266 1144 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 DDIT3P35638 169 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 TCIRG1Q13488 830 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 TEAD4Q15561 434 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 LRRTM3Q86VH5 581 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 JARID2Q92833 1246 aaPredicted RBP9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 SYAP1Q96A49 352 aaPredicted RBP9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 CDK5RAP3Q96JB5 506 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 CSRNP2Q9H175 543 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 INTS7Q9NVH2 962 aaKnown RBP9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 STK26Q9P289 416 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 XPO7Q9UIA9 1087 aaKnown RBP9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 ZNRF3Q9ULT6 936 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 TRAK1Q9UPV9 953 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
SCARNA9-201ENST00000530422 ERICH4A6NGS2 130 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 TMEM110-MUSTN1A8MSY1 372 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 SPINT1O43278 529 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 POLR3DP05423 398 aaPredicted RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 IMPDH2P12268 514 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 HOXC13P31276 330 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 ABCD1P33897 745 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 ZNF165P49910 485 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 PTSQ03393 145 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 TOMM20Q15388 145 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 SAFBQ15424 915 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 WDR45BQ5MNZ6 344 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 SH3PXD2AQ5TCZ1 1133 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 MRM1Q6IN84 353 aaKnown RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 C6orf15Q6UXA7 325 aaPredicted RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 LSRQ86X29 649 aaPredicted RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 SAMD14Q8IZD0 417 aaPredicted RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 USP33Q8TEY7 942 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 GJA10Q969M2 543 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 TMEM87BQ96K49 555 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 XPO4Q9C0E2 1151 aaKnown RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 DHX36Q9H2U1 1008 aaKnown RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 RIC8AQ9NPQ8 531 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 LUC7LQ9NQ29 371 aaKnown RBP9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 COMMD8Q9NX08 183 aa9.35□□□□□ -0.91
SCARNA9-201ENST00000530422 FANCIQ9NVI1 1328 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 GABRDO14764 452 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 NBNO60934 754 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 GNRH1P01148 92 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 ARAFP10398 606 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 MCM4P33991 863 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 DDB1Q16531 1140 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 DNAJC21Q5F1R6 531 aaKnown RBP9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 SPECC1Q5M775 1068 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 ANKRD45Q5TZF3 282 aa9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 PDE12Q6L8Q7 609 aaKnown RBP9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
SCARNA9-201ENST00000530422 LHFPL2Q6ZUX7 228 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms