RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 RAB3GAP1Q15042 981 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 TTF1Q15361 905 aaPredicted RBP9.06□□□□□ -0.96
NUP98-217ENST00000530345 ERC1Q8IUD2 1116 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 DBNDD2Q9BQY9 259 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 RPAP3Q9H6T3 665 aaPredicted RBP9.06□□□□□ -0.96
NUP98-217ENST00000530345 SWAP70Q9UH65 585 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 SAP30BPQ9UHR5 308 aaKnown RBP9.06□□□□□ -0.96
NUP98-217ENST00000530345 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.06□□□□□ -0.96
NUP98-217ENST00000530345 CHD7Q9P2D1 2997 aa9.06□□□□□ -0.96
NUP98-217ENST00000530345 IDH1O75874 414 aaKnown RBP9.05□□□□□ -0.96
NUP98-217ENST00000530345 SLC25A27O95847 323 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 ADORA2AP29274 412 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 ZAP70P43403 619 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 ATP8B2P98198 1209 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 ZYXQ15942 572 aaKnown RBP9.05□□□□□ -0.96
NUP98-217ENST00000530345 POTEEQ6S8J3 1075 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 SLC39A5Q6ZMH5 540 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 TMEM179Q6ZVK1 233 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 MAFAQ8NHW3 353 aaPredicted RBP9.05□□□□□ -0.96
NUP98-217ENST00000530345 CRNKL1Q9BZJ0 848 aaKnown RBP9.05□□□□□ -0.96
NUP98-217ENST00000530345 SPATC1LQ9H0A9 340 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 SNRKQ9NRH2 765 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 FOXD4L1Q9NU39 408 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 FLRT1Q9NZU1 646 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 BTBD7Q9P203 1132 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 ATP11BQ9Y2G3 1177 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 TACC3Q9Y6A5 838 aa9.05□□□□□ -0.96
NUP98-217ENST00000530345 SURF6O75683 361 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 CYP2C19P33261 490 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 SHMT1P34896 483 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 ATN1P54259 1190 aaPredicted RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 GABPAQ06546 454 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 HSP90AB4PQ58FF6 505 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 ZKSCAN2Q63HK3 967 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 CCDC174Q6PII3 467 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 MSL3Q8N5Y2 521 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 MAGEB6Q8N7X4 407 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 MOV10L1Q9BXT6 1211 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 TANGO6Q9C0B7 1094 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 PIH1D3Q9NQM4 214 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 PDLIM7Q9NR12 457 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 DBNLQ9UJU6 430 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 DIS3Q9Y2L1 958 aaKnown RBP9.04□□□□□ -0.96
NUP98-217ENST00000530345 BRWD1Q9NSI6 2320 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 MROH7Q68CQ1 1323 aa9.04□□□□□ -0.96
NUP98-217ENST00000530345 WDR46O15213 610 aaKnown RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 PEX10O60683 326 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 POLR3DP05423 398 aaPredicted RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 RARBP10826 455 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 FCER1AP12319 257 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 ERCC3P19447 782 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 DYNLL1P63167 89 aaKnown RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 LRRC41Q15345 812 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 SHROOM1Q2M3G4 852 aaPredicted RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 RNF180Q86T96 592 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 AMOTL1Q8IY63 956 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 TRPV1Q8NER1 839 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 ACER1Q8TDN7 264 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUP98-217ENST00000530345 CCDC17Q96LX7 622 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 TOX2Q96NM4 488 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 CDX2Q99626 313 aaPredicted RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 TSEN34Q9BSV6 310 aaKnown RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 SEMA6BQ9H3T3 888 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 PRDM5Q9NQX1 630 aaPredicted RBP9.03□□□□□ -0.96
NUP98-217ENST00000530345 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 PIEZO1Q92508 2521 aa9.03□□□□□ -0.96
NUP98-217ENST00000530345 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 CCER2I3L3R5 266 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 KIAA0355O15063 1070 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 FLOT1O75955 427 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 CLTBP09497 229 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 FOSL2P15408 326 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 DSG3P32926 999 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 GUCY1A2P33402 732 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 SEPT2Q15019 361 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 SHHQ15465 462 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 TRIM60Q495X7 471 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 GJC2Q5T442 439 aaPredicted RBP9.02□□□□□ -0.97
NUP98-217ENST00000530345 FTSJ3Q8IY81 847 aaKnown RBP9.02□□□□□ -0.97
NUP98-217ENST00000530345 MIGA1Q8NAN2 632 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 FRAT1Q92837 279 aaPredicted RBP9.02□□□□□ -0.97
NUP98-217ENST00000530345 DDRGK1Q96HY6 314 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 MAML3Q96JK9 1138 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 RNPC3Q96LT9 517 aaKnown RBP9.02□□□□□ -0.97
NUP98-217ENST00000530345 RIOK1Q9BRS2 568 aaKnown RBP9.02□□□□□ -0.97
NUP98-217ENST00000530345 PRDM6Q9NQX0 595 aa9.02□□□□□ -0.97
NUP98-217ENST00000530345 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 AKR1A1P14550 325 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 ADCYAP1R1P41586 468 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 ICA1Q05084 483 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 FPGSQ05932 587 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 KCTD2Q14681 263 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 FAM47AQ5JRC9 791 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 ANKRD33Q7Z3H0 272 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 NCAPG2Q86XI2 1143 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 TMEM57Q8N5G2 664 aa9.01□□□□□ -0.97
NUP98-217ENST00000530345 NUP133Q8WUM0 1156 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms