RNA–Protein interactions for RNA: ENST00000529757.5

PACS1-209, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PACS1, Length 1,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-209ENST00000529757 PRPF3O43395 683 aaKnown RBP19.28■□□□□ 0.68
PACS1-209ENST00000529757 PTMSP20962 102 aa19.28■□□□□ 0.68
PACS1-209ENST00000529757 MAP3K10Q02779 954 aa19.28■□□□□ 0.68
PACS1-209ENST00000529757 LRRC47Q8N1G4 583 aaKnown RBP19.28■□□□□ 0.68
PACS1-209ENST00000529757 TEPSINQ96N21 525 aa19.28■□□□□ 0.68
PACS1-209ENST00000529757 ZSCAN16Q9H4T2 348 aaPredicted RBP19.28■□□□□ 0.68
PACS1-209ENST00000529757 NYAP2Q9P242 653 aa19.28■□□□□ 0.68
PACS1-209ENST00000529757 SCAF8Q9UPN6 1271 aaKnown RBP19.28■□□□□ 0.68
PACS1-209ENST00000529757 PALM3A6NDB9 673 aaPredicted RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 PARP1P09874 1014 aaKnown RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 ATP2B2Q01814 1243 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 ICA1Q05084 483 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 RESTQ13127 1097 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 TRIM29Q14134 588 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 RRP1BQ14684 758 aaKnown RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 SEPT2Q15019 361 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 SHROOM1Q2M3G4 852 aaPredicted RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 ANGEL2Q5VTE6 544 aaKnown RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 CHAMP1Q96JM3 812 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 LZTS2Q9BRK4 669 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 DEFB129Q9H1M3 183 aa19.27■□□□□ 0.68
PACS1-209ENST00000529757 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
PACS1-209ENST00000529757 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 GH2P01242 217 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 GUCY1A2P33402 732 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 OTUD7BQ6GQQ9 843 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 DPY19L2Q6NUT2 758 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 STAG2Q8N3U4 1231 aa19.27■□□□□ 0.67
PACS1-209ENST00000529757 ADARB2Q9NS39 739 aaKnown RBP19.27■□□□□ 0.67
PACS1-209ENST00000529757 V9GY48 417 aaPredicted RBP19.27■□□□□ 0.67
PACS1-209ENST00000529757 EEF2P13639 858 aaKnown RBP19.26■□□□□ 0.67
PACS1-209ENST00000529757 MKL1Q969V6 931 aa19.26■□□□□ 0.67
PACS1-209ENST00000529757 GJB4Q9NTQ9 266 aa19.26■□□□□ 0.67
PACS1-209ENST00000529757 GGA3Q9NZ52 723 aa19.26■□□□□ 0.67
PACS1-209ENST00000529757 RBM27Q9P2N5 1060 aaKnown RBP19.26■□□□□ 0.67
PACS1-209ENST00000529757 USP17L5A8MUK1 530 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 SOCS7O14512 581 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 PDHBP11177 359 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 HIRAP54198 1017 aaPredicted RBP19.25■□□□□ 0.67
PACS1-209ENST00000529757 JAG1P78504 1218 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 KRT40Q6A162 431 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 USP17L2Q6R6M4 530 aa19.25■□□□□ 0.67
PACS1-209ENST00000529757 KLRF2D3W0D1 207 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 PKN1Q16512 942 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 ZBTB21Q9ULJ3 1066 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 GOLGA8HP0CJ92 632 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 DNM1Q05193 864 aaKnown RBP19.24■□□□□ 0.67
PACS1-209ENST00000529757 HOOK2Q96ED9 719 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 L3MBTL3Q96JM7 780 aaPredicted RBP19.24■□□□□ 0.67
PACS1-209ENST00000529757 SPZ1Q9BXG8 430 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 PPP2R3BQ9Y5P8 575 aa19.24■□□□□ 0.67
PACS1-209ENST00000529757 PITPNM2Q9BZ72 1349 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 hCG_1642624A0A1W2PR95 340 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 XBP1P17861 261 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 NCLP19338 710 aaKnown RBP19.23■□□□□ 0.67
PACS1-209ENST00000529757 SMARCA1P28370 1054 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 CAP2P40123 477 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 ANP32EQ9BTT0 268 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 CNPY2Q9Y2B0 182 aa19.23■□□□□ 0.67
PACS1-209ENST00000529757 MYH6P13533 1939 aa19.22■□□□□ 0.67
PACS1-209ENST00000529757 KRT85P78386 507 aa19.22■□□□□ 0.67
PACS1-209ENST00000529757 KIF23Q02241 960 aaPredicted RBP19.22■□□□□ 0.67
PACS1-209ENST00000529757 FAM173BQ6P4H8 233 aa19.22■□□□□ 0.67
PACS1-209ENST00000529757 SYNPO2Q9UMS6 1093 aa19.22■□□□□ 0.67
PACS1-209ENST00000529757 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
PACS1-209ENST00000529757 PHF20L1A8MW92 1017 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 SCG2P13521 617 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 ZNF543Q08ER8 600 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 SAFBQ15424 915 aaKnown RBP eCLIP19.21■□□□□ 0.67
PACS1-209ENST00000529757 PFKFB3Q16875 520 aaPredicted RBP19.21■□□□□ 0.67
PACS1-209ENST00000529757 NBPF12Q5TAG4 269 aaPredicted RBP19.21■□□□□ 0.67
PACS1-209ENST00000529757 DCAF15Q66K64 600 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 BRAPQ7Z569 592 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 ARHGEF10LQ9HCE6 1279 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 LMBRD1Q9NUN5 540 aa19.21■□□□□ 0.67
PACS1-209ENST00000529757 GLTPD2A6NH11 291 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 CYTH3O43739 400 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 PRPF40AO75400 957 aaKnown RBP19.2■□□□□ 0.66
PACS1-209ENST00000529757 MMP1P03956 469 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 ASNSP08243 561 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 CSPP1Q1MSJ5 1256 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 CCDC96Q2M329 555 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 SLC35G1Q2M3R5 365 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 GPATCH4Q5T3I0 446 aaKnown RBP19.2■□□□□ 0.66
PACS1-209ENST00000529757 GMCL1P1Q8NEA9 526 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 DCAF4Q8WV16 495 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 PIBF1Q8WXW3 757 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 GNL2Q13823 731 aaKnown RBP19.2■□□□□ 0.66
PACS1-209ENST00000529757 SLFN13Q68D06 897 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 TMEM87AQ8NBN3 555 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 GDPD2Q9HCC8 539 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 VPS54Q9P1Q0 977 aa19.2■□□□□ 0.66
PACS1-209ENST00000529757 KCNJ14Q9UNX9 436 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms