RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 FERD3LQ96RJ6 166 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 GPATCH2Q9NW75 528 aa7.34□□□□□ -1.23
C11orf88-204ENST00000529661 WASH4PA8MWX3 477 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 PAK2Q13177 524 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 CDCP2Q5VXM1 449 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 ASPNQ9BXN1 380 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 TRIT1Q9H3H1 467 aaKnown RBP7.33□□□□□ -1.24
C11orf88-204ENST00000529661 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 LMCD1Q9NZU5 365 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 PPT2Q9UMR5 302 aa7.33□□□□□ -1.24
C11orf88-204ENST00000529661 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.33□□□□□ -1.24
C11orf88-204ENST00000529661 PAX4O43316 350 aa7.32□□□□□ -1.24
C11orf88-204ENST00000529661 IGSF3O75054 1194 aa7.32□□□□□ -1.24
C11orf88-204ENST00000529661 TPP2P29144 1249 aaPredicted RBP7.32□□□□□ -1.24
C11orf88-204ENST00000529661 CREG2Q8IUH2 290 aa7.32□□□□□ -1.24
C11orf88-204ENST00000529661 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
C11orf88-204ENST00000529661 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.24
C11orf88-204ENST00000529661 DUSP15Q9H1R2 295 aaPredicted RBP7.32□□□□□ -1.24
C11orf88-204ENST00000529661 FAM86C2PA6NEL3 165 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 MEIS3P2A8K0S8 358 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 BIN1O00499 593 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 NME1P15531 152 aaKnown RBP7.31□□□□□ -1.24
C11orf88-204ENST00000529661 RNF4P78317 190 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 C8orf37Q96NL8 207 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 DUSP13Q9UII6 198 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 ZNRF3Q9ULT6 936 aa7.31□□□□□ -1.24
C11orf88-204ENST00000529661 CLEC3AO75596 197 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 IMPDH2P12268 514 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 ITGB5P18084 799 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 CLEC16AQ2KHT3 1053 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 TMPRSS7Q7RTY8 843 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 GPRASP2Q96D09 838 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 ZNF512BQ96KM6 892 aaPredicted RBP7.3□□□□□ -1.24
C11orf88-204ENST00000529661 GPR62Q9BZJ7 368 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 ASCC2Q9H1I8 757 aaPredicted RBP7.3□□□□□ -1.24
C11orf88-204ENST00000529661 GINM1Q9NU53 330 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 SLAMF8Q9P0V8 285 aa7.3□□□□□ -1.24
C11orf88-204ENST00000529661 PAPLNO95428 1278 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 ESR1P03372 595 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 JUNBP17275 347 aaPredicted RBP7.29□□□□□ -1.24
C11orf88-204ENST00000529661 LTKP29376 864 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 CCDC81Q6ZN84 652 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 ATG4DQ86TL0 474 aaPredicted RBP7.29□□□□□ -1.24
C11orf88-204ENST00000529661 TSPYL5Q86VY4 417 aaPredicted RBP7.29□□□□□ -1.24
C11orf88-204ENST00000529661 SLC6A18Q96N87 628 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 SLC9A7Q96T83 725 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 CCSER2Q9H7U1 834 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 EFR3BQ9Y2G0 817 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 RNF114Q9Y508 228 aa7.29□□□□□ -1.24
C11orf88-204ENST00000529661 SHISA3A0PJX4 238 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 SRFP11831 508 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 ERCC5P28715 1186 aaPredicted RBP7.28□□□□□ -1.24
C11orf88-204ENST00000529661 CCNFP41002 786 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 ZC3H6P61129 1189 aaKnown RBP7.28□□□□□ -1.24
C11orf88-204ENST00000529661 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 GAB4Q2WGN9 574 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 NBPF12Q5TAG4 269 aaPredicted RBP7.28□□□□□ -1.24
C11orf88-204ENST00000529661 VWCEQ96DN2 955 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 ALPK1Q96QP1 1244 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 MKRN2Q9H000 416 aaKnown RBP7.28□□□□□ -1.24
C11orf88-204ENST00000529661 ACBD3Q9H3P7 528 aa7.28□□□□□ -1.24
C11orf88-204ENST00000529661 TNFRSF10CO14798 259 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 EGR3Q06889 387 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 NMIQ13287 307 aaPredicted RBP7.27□□□□□ -1.25
C11orf88-204ENST00000529661 TMEM192Q8IY95 271 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 ASIC4Q96FT7 647 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 SPATA32Q96LK8 384 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 CRBNQ96SW2 442 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 TGIF2Q9GZN2 237 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 CTNND2Q9UQB3 1225 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 PCDHA11Q9Y5I1 949 aa7.27□□□□□ -1.25
C11orf88-204ENST00000529661 DNAJC25-GNG10A0A024R161 153 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 ACRP10323 421 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 SNW1Q13573 536 aaKnown RBP7.26□□□□□ -1.25
C11orf88-204ENST00000529661 COL9A2Q14055 689 aaPredicted RBP7.26□□□□□ -1.25
C11orf88-204ENST00000529661 NBPF9Q3BBW0 867 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 RUFY4Q6ZNE9 571 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 TMC3Q7Z5M5 1100 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 TTC6Q86TZ1 520 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 FLAD1Q8NFF5 587 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 FAM168AQ92567 244 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 TM9SF2Q99805 663 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 INPP5FQ9Y2H2 1132 aa7.26□□□□□ -1.25
C11orf88-204ENST00000529661 GJA8P48165 433 aa7.25□□□□□ -1.25
C11orf88-204ENST00000529661 NASPP49321 788 aaPredicted RBP7.25□□□□□ -1.25
C11orf88-204ENST00000529661 RALGPS1Q5JS13 557 aa7.25□□□□□ -1.25
C11orf88-204ENST00000529661 GOLGA2P5Q9HBQ8 144 aa7.25□□□□□ -1.25
C11orf88-204ENST00000529661 GDNFP39905 211 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 SOX9P48436 509 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 HK2P52789 917 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 NAALADL2Q58DX5 795 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 TDRD10Q5VZ19 366 aaKnown RBP7.24□□□□□ -1.25
C11orf88-204ENST00000529661 INTS3Q68E01 1043 aaKnown RBP7.24□□□□□ -1.25
C11orf88-204ENST00000529661 LSRQ86X29 649 aaPredicted RBP7.24□□□□□ -1.25
C11orf88-204ENST00000529661 KRTAP1-3Q8IUG1 177 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 RASGRP4Q8TDF6 673 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 CCDC120Q96HB5 630 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 DHRS1Q96LJ7 313 aa7.24□□□□□ -1.25
C11orf88-204ENST00000529661 ADAMTS10Q9H324 1103 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms