RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 ICA1Q05084 483 aa14.44□□□□□ -0.1
COPB1-206ENST00000529210 ZYXQ15942 572 aaKnown RBP14.44□□□□□ -0.1
COPB1-206ENST00000529210 RWDD1Q9H446 243 aaPredicted RBP14.44□□□□□ -0.1
COPB1-206ENST00000529210 RPAP3Q9H6T3 665 aaPredicted RBP14.44□□□□□ -0.1
COPB1-206ENST00000529210 VCPKMTQ9H867 229 aa14.44□□□□□ -0.1
COPB1-206ENST00000529210 KANSL2Q9H9L4 492 aa14.44□□□□□ -0.1
COPB1-206ENST00000529210 PAK6Q9NQU5 681 aaPredicted RBP14.44□□□□□ -0.1
COPB1-206ENST00000529210 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
COPB1-206ENST00000529210 HMGCRP04035 888 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 INHAP05111 366 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 CCNA1P78396 465 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 COG2Q14746 738 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 MORN1Q5T089 497 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 UBE2Q1Q7Z7E8 422 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 TRMT44Q8IYL2 757 aaKnown RBP14.43□□□□□ -0.1
COPB1-206ENST00000529210 EVI5LQ96CN4 794 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 NUDT12Q9BQG2 462 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.43□□□□□ -0.1
COPB1-206ENST00000529210 RNF208Q9H0X6 261 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 HOXC10Q9NYD6 342 aa14.43□□□□□ -0.1
COPB1-206ENST00000529210 WDR46O15213 610 aaKnown RBP14.42□□□□□ -0.1
COPB1-206ENST00000529210 ELNP15502 786 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 RASA1P20936 1047 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 KIAA1755Q5JYT7 1200 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 GPR142Q7Z601 462 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 IFNL3Q8IZI9 196 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 MB21D1Q8N884 522 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 PORCNQ9H237 461 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 OSBPL3Q9H4L5 887 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 BIN2Q9UBW5 565 aaPredicted RBP14.42□□□□□ -0.1
COPB1-206ENST00000529210 SYNPO2Q9UMS6 1093 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 ZNF236Q9UL36 1845 aa14.42□□□□□ -0.1
COPB1-206ENST00000529210 IGKV6D-41A0A0C4DH26 115 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 PEX10O60683 326 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 SGPL1O95470 568 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 DSG3P32926 999 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 MAP3K21Q5TCX8 1036 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 PLEKHH3Q7Z736 793 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 U2AF1L4Q8WU68 220 aaKnown RBP14.41□□□□□ -0.1
COPB1-206ENST00000529210 SEC62Q99442 399 aaKnown RBP14.41□□□□□ -0.1
COPB1-206ENST00000529210 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 NACAP1Q9BZK3 213 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 BTBD7Q9P203 1132 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 NYAP2Q9P242 653 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 PLIN4Q96Q06 1357 aa14.41□□□□□ -0.1
COPB1-206ENST00000529210 HOXC6P09630 235 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 EEF2P13639 858 aaKnown RBP14.4□□□□□ -0.1
COPB1-206ENST00000529210 RGS2P41220 211 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 TDO2P48775 406 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 SHCBP1Q8NEM2 672 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 TRIB2Q92519 343 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 CRISPLD2Q9H0B8 497 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 HELLSQ9NRZ9 838 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 ADAMTS5Q9UNA0 930 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 RPTORQ8N122 1335 aa14.4□□□□□ -0.1
COPB1-206ENST00000529210 SLC15A5A6NIM6 579 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 MINDY4BA8MYZ0 360 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 FOXP2O15409 715 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 MYCP01106 439 aaPredicted RBP14.39□□□□□ -0.11
COPB1-206ENST00000529210 IGHA2P01877 340 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 IGHDP01880 384 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 NUCB1Q02818 461 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 CHD1LQ86WJ1 897 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 CLEC10AQ8IUN9 316 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 MKL1Q969V6 931 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 APBA2Q99767 749 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 MKNK2Q9HBH9 465 aa14.39□□□□□ -0.11
COPB1-206ENST00000529210 STRNO43815 780 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 PTPREP23469 700 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 MAP2K5Q13163 448 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 GRB14Q14449 540 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 ALX1Q15699 326 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 CCAR1Q8IX12 1150 aaKnown RBP14.38□□□□□ -0.11
COPB1-206ENST00000529210 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 LNPKQ9C0E8 428 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 SPATC1LQ9H0A9 340 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
COPB1-206ENST00000529210 NAPBQ9H115 298 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 GOPCQ9HD26 462 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 ANAPC4Q9UJX5 808 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 ZMYM6O95789 1325 aa14.38□□□□□ -0.11
COPB1-206ENST00000529210 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 FLOT1O75955 427 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 APPP05067 770 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 CYP2B6P20813 491 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 PDE4BQ07343 736 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 PLEKHM2Q8IWE5 1019 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 ABRAQ8N0Z2 381 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 ANKLE1Q8NAG6 615 aa14.37□□□□□ -0.11
COPB1-206ENST00000529210 MOV10L1Q9BXT6 1211 aaKnown RBP14.37□□□□□ -0.11
COPB1-206ENST00000529210 HMX1Q9NP08 348 aaPredicted RBP14.37□□□□□ -0.11
COPB1-206ENST00000529210 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.37□□□□□ -0.116e-6■■□□□ 13.9
COPB1-206ENST00000529210 SLC3A2P08195 630 aaKnown RBP14.36□□□□□ -0.11
COPB1-206ENST00000529210 FGRP09769 529 aa14.36□□□□□ -0.11
COPB1-206ENST00000529210 ZKSCAN1P17029 563 aaPredicted RBP14.36□□□□□ -0.11
COPB1-206ENST00000529210 PPARAQ07869 468 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms