RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 ADCYAP1R1P41586 468 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 PLCD1P51178 756 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 TTF1Q15361 905 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-212ENST00000529205 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 C1orf53Q5VUE5 145 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 NCAPG2Q86XI2 1143 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 ABRAQ8N0Z2 381 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 TMEM57Q8N5G2 664 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 SYMPKQ92797 1274 aaKnown RBP16.38■□□□□ 0.21
HIF3A-212ENST00000529205 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
HIF3A-212ENST00000529205 SH2D4AQ9H788 454 aa16.38■□□□□ 0.21
HIF3A-212ENST00000529205 NOP58Q9Y2X3 529 aaKnown RBP16.38■□□□□ 0.21
HIF3A-212ENST00000529205 MYH1P12882 1939 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 FCER1AP12319 257 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 C9orf50Q5SZB4 431 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 EAF2Q96CJ1 260 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-212ENST00000529205 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 MCM9Q9NXL9 1143 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 TLR7Q9NYK1 1049 aaKnown RBP16.37■□□□□ 0.21
HIF3A-212ENST00000529205 TNNQ9UQP3 1299 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
HIF3A-212ENST00000529205 FLOT1O75955 427 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 IGHA2P01877 340 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 RARBP10826 455 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 FOSL2P15408 326 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 DSG3P32926 999 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 SNX17Q15036 470 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 TMEM179Q6ZVK1 233 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 RNF180Q86T96 592 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 ERC1Q8IUD2 1116 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 FTSJ3Q8IY81 847 aaKnown RBP16.36■□□□□ 0.21
HIF3A-212ENST00000529205 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
HIF3A-212ENST00000529205 TMEM265A0A087WTH1 108 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 COBLO75128 1261 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 SLC25A27O95847 323 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 GUCY1A2P33402 732 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 LRRC41Q15345 812 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 MYLIPQ8WY64 445 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 MAML3Q96JK9 1138 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 ANTXR1Q9H6X2 564 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 XPNPEP3Q9NQH7 507 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 PDLIM7Q9NR12 457 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 SWAP70Q9UH65 585 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 NRBP1Q9UHY1 535 aa16.35■□□□□ 0.21
HIF3A-212ENST00000529205 A0A1W2PRG0 241 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 RAG1P15918 1043 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 GABPAQ06546 454 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 PRAMEF19Q5SWL8 479 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 SLC9C2Q5TAH2 1124 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 AACSQ86V21 672 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 AMOTL1Q8IY63 956 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 RNPC3Q96LT9 517 aaKnown RBP16.34■□□□□ 0.21
HIF3A-212ENST00000529205 RIOK1Q9BRS2 568 aaKnown RBP16.34■□□□□ 0.21
HIF3A-212ENST00000529205 C1orf115Q9H7X2 142 aa16.34■□□□□ 0.21
HIF3A-212ENST00000529205 TRIM43BA6NCK2 446 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 CLTBP09497 229 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 TLE2Q04725 743 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 KCTD2Q14681 263 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 HSP90AB4PQ58FF6 505 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 FAM47AQ5JRC9 791 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-212ENST00000529205 ITPRIPQ8IWB1 547 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 TRIM43Q96BQ3 446 aaPredicted RBP16.33■□□□□ 0.2
HIF3A-212ENST00000529205 PHF24Q9UPV7 400 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 ZNF236Q9UL36 1845 aa16.33■□□□□ 0.2
HIF3A-212ENST00000529205 LTBP2Q14767 1821 aa16.32■□□□□ 0.2
HIF3A-212ENST00000529205 SH3RF1Q7Z6J0 888 aa16.32■□□□□ 0.2
HIF3A-212ENST00000529205 ATG4CQ96DT6 458 aa16.32■□□□□ 0.2
HIF3A-212ENST00000529205 MMP19Q99542 508 aa16.32■□□□□ 0.2
HIF3A-212ENST00000529205 TTYH1Q9H313 450 aaPredicted RBP16.32■□□□□ 0.2
HIF3A-212ENST00000529205 TMX2Q9Y320 296 aa16.32■□□□□ 0.2
HIF3A-212ENST00000529205 MYO5AQ9Y4I1 1855 aaKnown RBP16.31■□□□□ 0.2
HIF3A-212ENST00000529205 WDR46O15213 610 aaKnown RBP16.31■□□□□ 0.2
HIF3A-212ENST00000529205 ICA1Q05084 483 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 FPGSQ05932 587 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 SPICE1Q8N0Z3 855 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 DDRGK1Q96HY6 314 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 CCDC17Q96LX7 622 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 VCPKMTQ9H867 229 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 PRDM6Q9NQX0 595 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 TMEM39AQ9NV64 488 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 CNPY2Q9Y2B0 182 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 DIS3Q9Y2L1 958 aaKnown RBP16.31■□□□□ 0.2
HIF3A-212ENST00000529205 RLFQ13129 1914 aa16.31■□□□□ 0.2
HIF3A-212ENST00000529205 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-212ENST00000529205 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-212ENST00000529205 DCDC2CA8MYV0 355 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 AKR1A1P14550 325 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 COPB2P35606 906 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 SDR42E1Q8WUS8 393 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 TINF2Q9BSI4 451 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 DCP1AQ9NPI6 582 aaPredicted RBP16.3■□□□□ 0.2
HIF3A-212ENST00000529205 A0A0C4DFX4 3053 aa16.3■□□□□ 0.2
HIF3A-212ENST00000529205 ZNF532Q9HCE3 1301 aa16.29■□□□□ 0.2
HIF3A-212ENST00000529205 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
HIF3A-212ENST00000529205 PQBP1O60828 265 aaKnown RBP16.29■□□□□ 0.2
HIF3A-212ENST00000529205 PGK1P00558 417 aa16.29■□□□□ 0.2
HIF3A-212ENST00000529205 PDE6AP16499 860 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms