RNA–Protein interactions for RNA: ENST00000528967.1

KNL1-205, Transcript of kinetochore scaffold 1, human

TSL 5

Gene KNL1, Length 254 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNL1-205	ENST00000528967	CYP7A1	P22680	504 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	TRHR	P34981	398 aa	Predicted RBP	4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	KIR3DL1	P43629	444 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	ETF1	P62495	437 aa	Known RBP	4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	TNK2	Q07912	1038 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	CAMK2G	Q13555	558 aa	Predicted RBP	4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	ZNF394	Q53GI3	561 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	WIPI1	Q5MNZ9	446 aa	Predicted RBP	4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	SNAP47	Q5SQN1	464 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	BNC2	Q6ZN30	1099 aa	Predicted RBP	4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	HDX	Q7Z353	690 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	HID1	Q8IV36	788 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	GOLM1	Q8NBJ4	401 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	RNF34	Q969K3	372 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	PLPPR2	Q96GM1	343 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	COX4I2	Q96KJ9	171 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	RSRP1	Q9BUV0	290 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	KRTAP17-1	Q9BYP8	105 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	RNF32	Q9H0A6	362 aa		4.97	□□□□□ -1.61
KNL1-205	ENST00000528967	SCAMP3	O14828	347 aa	Known RBP	4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	FOXD2	O60548	495 aa	Predicted RBP	4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	F13A1	P00488	732 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	VAMP1	P23763	118 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	PWP1	Q13610	501 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	CREG2	Q8IUH2	290 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	BAHD1	Q8TBE0	780 aa	Predicted RBP	4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	XAGE3	Q8WTP9	111 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	RHOV	Q96L33	236 aa		4.96	□□□□□ -1.62
KNL1-205	ENST00000528967	RBAK-RBAKDN	I3L0D1	243 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	TLR3	O15455	904 aa	Known RBP	4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	CST3	P01034	146 aa	Predicted RBP	4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	EIF4A3	P38919	411 aa	Known RBP	4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	DLG4	P78352	724 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	HDLBP	Q00341	1268 aa	Known RBP	4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	LMNB2	Q03252	620 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	PRAMEF13	Q5VWM6	474 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	FBXL19	Q6PCT2	694 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	CDH24	Q86UP0	819 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	USP48	Q86UV5	1035 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	FBXO27	Q8NI29	283 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	PIWIL2	Q8TC59	973 aa	Known RBP	4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	MCOLN1	Q9GZU1	580 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	C19orf44	Q9H6X5	657 aa		4.95	□□□□□ -1.62
KNL1-205	ENST00000528967	WASH4P	A8MWX3	477 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	BPNT1	O95861	308 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	ZNF605	Q86T29	641 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	IRF2BP1	Q8IU81	584 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	ZNF296	Q8WUU4	475 aa	Predicted RBP	4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	SLC6A17	Q9H1V8	727 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	METTL5	Q9NRN9	209 aa	Known RBP	4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	ADAMTS1	Q9UHI8	967 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967	SNCAIP	Q9Y6H5	919 aa		4.94	□□□□□ -1.62
KNL1-205	ENST00000528967		A0A0G2JLL6	359 aa	Predicted RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967		E9PSI1	815 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	GRIN3B	O60391	1043 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	PEX10	O60683	326 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	SEMA7A	O75326	666 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	TPP2	P29144	1249 aa	Predicted RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	GRK4	P32298	578 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	RACK1	P63244	317 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	RPL6	Q02878	288 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	TMEM132E	Q6IEE7	984 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	DBX2	Q6ZNG2	339 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	NT5DC4	Q86YG4	428 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	PDZD8	Q8NEN9	1154 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	GATAD2B	Q8WXI9	593 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	KCNC2	Q96PR1	638 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	DUSP15	Q9H1R2	295 aa	Predicted RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	SP110	Q9HB58	689 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	CNOT6	Q9ULM6	557 aa	Known RBP	4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	CORIN	Q9Y5Q5	1042 aa		4.93	□□□□□ -1.62
KNL1-205	ENST00000528967	MYOCOS	A0A1B0GUC4	107 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	FAM221A	A4D161	298 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	GFRA2	O00451	464 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	CILP	O75339	1184 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	SYN1	P17600	705 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	GART	P22102	1010 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	ZNF385B	Q569K4	471 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	TCERG1L	Q5VWI1	586 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	DIEXF	Q68CQ4	756 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	METTL16	Q86W50	562 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	LILRA2	Q8N149	483 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	OXR1	Q8N573	874 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	MARCH10	Q8NA82	808 aa	Predicted RBP	4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	SPON2	Q9BUD6	331 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	TRIT1	Q9H3H1	467 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	UBP1	Q9NZI7	540 aa		4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	SUPT16H	Q9Y5B9	1047 aa	Known RBP	4.92	□□□□□ -1.62
KNL1-205	ENST00000528967	ZGLP1	P0C6A0	271 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	TCF3	P15923	654 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	CRK	P46108	304 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	EGR3	Q06889	387 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	NFIX	Q14938	502 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	GAB4	Q2WGN9	574 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	TIGD5	Q53EQ6	642 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	FAM196A	Q6ZSG2	479 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	CCDC84	Q86UT8	332 aa	Predicted RBP	4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	KIAA0825	Q8IV33	1275 aa		4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	ZNF552	Q9H707	407 aa	Predicted RBP	4.91	□□□□□ -1.62
KNL1-205	ENST00000528967	DUSP13	Q9UII6	198 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms