RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CRNKL1Q9BZJ0 848 aaKnown RBP20.07■□□□□ 0.8
LTBP3-210ENST00000528516 CNNM2Q9H8M5 875 aa20.07■□□□□ 0.8
LTBP3-210ENST00000528516 BCCIPQ9P287 314 aaKnown RBP eCLIP20.07■□□□□ 0.8
LTBP3-210ENST00000528516 ILDR1Q86SU0 546 aaPredicted RBP20.06■□□□□ 0.8
LTBP3-210ENST00000528516 ACRBPQ8NEB7 543 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 POLR3EQ9NVU0 708 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 TAB2Q9NYJ8 693 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 FBXO3Q9UK99 471 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 ZBTB1Q9Y2K1 713 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 A0A0U1RQJ8 604 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 BRINP3Q76B58 766 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 NOA1Q8NC60 698 aaKnown RBP20.06■□□□□ 0.8
LTBP3-210ENST00000528516 ATRIPQ8WXE1 791 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 ZNF622Q969S3 477 aaKnown RBP eCLIP20.06■□□□□ 0.8
LTBP3-210ENST00000528516 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 CTNND2Q9UQB3 1225 aa20.06■□□□□ 0.8
LTBP3-210ENST00000528516 ZEB2O60315 1214 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 CASP1P29466 404 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 NAPAP54920 295 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 CCDC40Q4G0X9 1142 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 SPATA5Q8NB90 893 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 SAMSN1Q9NSI8 373 aaKnown RBP20.05■□□□□ 0.8
LTBP3-210ENST00000528516 PCDH11XQ9BZA7 1347 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 PCDH11YQ9BZA8 1340 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 USP17L12C9JPN9 530 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 USP17L21D6R901 530 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 MACROD2A1Z1Q3 448 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 HNRNPH1P31943 449 aaKnown RBP20.05■□□□□ 0.8
LTBP3-210ENST00000528516 GNGT1P63211 74 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 HLTFQ14527 1009 aaKnown RBP eCLIP20.05■□□□□ 0.8
LTBP3-210ENST00000528516 SMIM5Q71RC9 77 aa20.05■□□□□ 0.8
LTBP3-210ENST00000528516 GSPT2Q8IYD1 628 aaKnown RBP20.05■□□□□ 0.8
LTBP3-210ENST00000528516 RPGRQ92834 1020 aaKnown RBP20.05■□□□□ 0.8
LTBP3-210ENST00000528516 NDUFAB1O14561 156 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 PRPF4BQ13523 1007 aaKnown RBP20.04■□□□□ 0.8
LTBP3-210ENST00000528516 ENC1O14682 589 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 CHRM1P11229 460 aaPredicted RBP20.04■□□□□ 0.8
LTBP3-210ENST00000528516 KIF5BP33176 963 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 TNNI2P48788 182 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 CDR1P51861 262 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 DSCC1Q9BVC3 393 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 TUBB4BP68371 445 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 TSGA10IPQ3SY00 556 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 POTEDQ86YR6 584 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 SLF1Q9BQI6 1058 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 ADGRG1Q9Y653 693 aa20.04■□□□□ 0.8
LTBP3-210ENST00000528516 TMCO5BA8MYB1 307 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 TUBBP07437 444 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 NF2P35240 595 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
LTBP3-210ENST00000528516 CEP57Q86XR8 500 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 RBL2Q08999 1139 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 SUGP1Q8IWZ8 645 aaKnown RBP20.03■□□□□ 0.8
LTBP3-210ENST00000528516 MYO6Q9UM54 1294 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 MED23Q9ULK4 1368 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 FOXN1O15353 648 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 MCM3P25205 808 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 RFC4P35249 363 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 KRT2P35908 639 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 SCARF1Q14162 830 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 PTPROQ16827 1216 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 WHAMMP3Q1A5X7 153 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 ADAMTSL3P82987 1691 aa20.03■□□□□ 0.8
LTBP3-210ENST00000528516 AKAP12Q02952 1782 aa20.02■□□□□ 0.8
LTBP3-210ENST00000528516 MROH7-TTC4A0A0A0MT08 1334 aa20.02■□□□□ 0.8
LTBP3-210ENST00000528516 GOLGA6BA6NDN3 693 aa20.02■□□□□ 0.8
LTBP3-210ENST00000528516 SF3A3Q12874 501 aaKnown RBP eCLIP20.02■□□□□ 0.81e-6■■■■□ 22.3
LTBP3-210ENST00000528516 RAD9BQ6WBX8 426 aa20.02■□□□□ 0.8
LTBP3-210ENST00000528516 TMTC2Q8N394 836 aa20.02■□□□□ 0.8
LTBP3-210ENST00000528516 GGCXP38435 758 aa20.02■□□□□ 0.79
LTBP3-210ENST00000528516 TMEM139Q8IV31 216 aa20.02■□□□□ 0.79
LTBP3-210ENST00000528516 CAPS2Q9BXY5 557 aa20.02■□□□□ 0.79
LTBP3-210ENST00000528516 CCDC113Q9H0I3 377 aa20.02■□□□□ 0.79
LTBP3-210ENST00000528516 RPS6KA5O75582 802 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 GOLGA8HP0CJ92 632 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 PSEN1P49768 467 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 ZMYM1Q5SVZ6 1142 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 IFNL3Q8IZI9 196 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 PDE8AO60658 829 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 PPP2R5AQ15172 486 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 KANK3Q6NY19 840 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 POSTNQ15063 836 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 MSANTD4Q8NCY6 345 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 RASGRP4Q8TDF6 673 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.01■□□□□ 0.79
LTBP3-210ENST00000528516 EXOC1Q9NV70 894 aa20.01■□□□□ 0.79
LTBP3-210ENST00000528516 KIF28PB7ZC32 967 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 TUBB2AQ13885 445 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 RPAINQ86UA6 219 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 TUBB2BQ9BVA1 445 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 INTS13Q9NVM9 706 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 RAB21Q9UL25 225 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 TTF2Q9UNY4 1162 aaKnown RBP20■□□□□ 0.79
LTBP3-210ENST00000528516 TEX33O43247 280 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 CASP14P31944 242 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 SLC39A14Q15043 492 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 HLFQ16534 295 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 AKNAD1Q5T1N1 836 aa20■□□□□ 0.79
LTBP3-210ENST00000528516 ZNF274Q96GC6 653 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms