RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 KIF5BP33176 963 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 FKBP1AP62942 108 aaKnown RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 ATP2B2Q01814 1243 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 SOGA3Q5TF21 947 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 MYSM1Q5VVJ2 828 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 TMTC3Q6ZXV5 915 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 BRAPQ7Z569 592 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 OGFOD1Q8N543 542 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 SRBD1Q8N5C6 995 aaKnown RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 TMEM47Q9BQJ4 181 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 RNF26Q9BY78 433 aaPredicted RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 TAOK3Q9H2K8 898 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 ELP1O95163 1332 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 NID2Q14112 1375 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 BTBD18B2RXH4 712 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 LIG1P18858 919 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 SF3A1Q15459 793 aaKnown RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 RSBN1LQ6PCB5 846 aaPredicted RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 DIS3L2Q8IYB7 885 aaKnown RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 STAG2Q8N3U4 1231 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 NEDD1Q8NHV4 660 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 PGBD1Q96JS3 809 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 PRMT6Q96LA8 375 aaPredicted RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 TRIM34Q9BYJ4 488 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 CLIC4Q9Y696 253 aa8.88□□□□□ -0.99
SOX6-211ENST00000528429 BAZ2BQ9UIF8 2168 aaKnown RBP8.88□□□□□ -0.99
SOX6-211ENST00000528429 FSD2A1L4K1 749 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 DDTLA6NHG4 134 aaPredicted RBP8.87□□□□□ -0.99
SOX6-211ENST00000528429 AKR1B1P15121 316 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 ATP2B1P20020 1258 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 HDLBPQ00341 1268 aaKnown RBP8.87□□□□□ -0.99
SOX6-211ENST00000528429 FUT2Q10981 343 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 NR5A1Q13285 461 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 STK38Q15208 465 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CCDC178Q5BJE1 867 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CEP120Q8N960 986 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CPVLQ9H3G5 476 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 ISY1Q9ULR0 285 aaKnown RBP8.87□□□□□ -0.99
SOX6-211ENST00000528429 ZNRF3Q9ULT6 936 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 TCP10L2B9ZVM9 353 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 XBP1P17861 261 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 GABPAQ06546 454 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CAMK4Q16566 473 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CCDC183Q5T5S1 534 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
SOX6-211ENST00000528429 BANK1Q8NDB2 785 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 RNF217Q8TC41 542 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 GRPEL1Q9HAV7 217 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 CNTNAP5Q8WYK1 1306 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 PRPF3O43395 683 aaKnown RBP8.87□□□□□ -0.99
SOX6-211ENST00000528429 MMP1P03956 469 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 ZNF445P59923 1031 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 DMTNQ08495 405 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 DLGAP5Q15398 846 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 PKN1Q16512 942 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.87□□□□□ -0.99
SOX6-211ENST00000528429 MRIQ9BWK5 157 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 VEZTQ9HBM0 779 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 TCP11L1Q9NUJ3 509 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 DACT1Q9NYF0 836 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 TMOD2Q9NZR1 351 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 RCOR1Q9UKL0 485 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 HDAC9Q9UKV0 1011 aa8.87□□□□□ -0.99
SOX6-211ENST00000528429 COL4A5P29400 1685 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 VIL1P09327 827 aaKnown RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 VEGFAP15692 232 aaPredicted RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 MARCKSP29966 332 aaPredicted RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 SHMT1P34896 483 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 CXCL9Q07325 125 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 USP17L2Q6R6M4 530 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 TSHZ1Q6ZSZ6 1077 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 NOSTRINQ8IVI9 506 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 OTUD6BQ8N6M0 293 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 NLGN2Q8NFZ4 835 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 TRIM44Q96DX7 344 aaPredicted RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 PANK2Q9BZ23 570 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 CLIP2Q9UDT6 1046 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 MYH1P12882 1939 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 MYO3BQ8WXR4 1341 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 NFKBIEO00221 500 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 TOP1P11387 765 aaKnown RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 XRCC6P12956 609 aaKnown RBP eCLIP8.86□□□□□ -0.99
SOX6-211ENST00000528429 NT5C2P49902 561 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 RASSF7Q02833 373 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 GRM4Q14833 912 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 SHROOM1Q2M3G4 852 aaPredicted RBP8.86□□□□□ -0.99
SOX6-211ENST00000528429 ANO1Q5XXA6 986 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 ATL3Q6DD88 541 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 RNF214Q8ND24 703 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 ANKS1AQ92625 1134 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 GPKOWQ92917 476 aaPredicted RBP eCLIP8.86□□□□□ -0.99
SOX6-211ENST00000528429 IDI2Q9BXS1 227 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 VAT1LQ9HCJ6 419 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 RTEL1Q9NZ71 1219 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 SWAP70Q9UH65 585 aa8.86□□□□□ -0.99
SOX6-211ENST00000528429 CDK5RAP2Q96SN8 1893 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms