RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 MYH4Q9Y623 1939 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 TRIM75PA6NK02 468 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 PATL2C9JE40 543 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 USP17L12C9JPN9 530 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 USP17L21D6R901 530 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 POLR3DP05423 398 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 GUCY1A2P33402 732 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 PLA2G5P39877 138 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 CAP2P40123 477 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 PTH1RQ03431 593 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 PPATQ06203 517 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 GABPAQ06546 454 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 GPAT2Q6NUI2 795 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 METTL16Q86W50 562 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 CRACR2BQ8N4Y2 399 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 MAFAQ8NHW3 353 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 NACAP1Q9BZK3 213 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 PI4KBQ9UBF8 816 aa13.75□□□□□ -0.21
CCDC90B-210ENST00000528149 TBC1D12O60347 775 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 GH2P01242 217 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 IRF5Q13568 498 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 TREML2Q5T2D2 321 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 ANKLE1Q8NAG6 615 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 DSCC1Q9BVC3 393 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 ANO2Q9NQ90 1003 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 INCENPQ9NQS7 918 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 ZBTB21Q9ULJ3 1066 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 KCNH4Q9UQ05 1017 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 AFG3L2Q9Y4W6 797 aa13.74□□□□□ -0.21
CCDC90B-210ENST00000528149 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 MINDY4BA8MYZ0 360 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 AKR1B1P15121 316 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 GADL1Q6ZQY3 521 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 KIAA1211Q6ZU35 1233 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 ACER1Q8TDN7 264 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 HOOK2Q96ED9 719 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 CDX2Q99626 313 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 DHX36Q9H2U1 1008 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 C11orf49Q9H6J7 331 aa13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-210ENST00000528149 TNPO2O14787 897 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 CTNND1O60716 968 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 FGAP02671 866 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 HMGCS2P54868 508 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 HAND2P61296 217 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 MDM2Q00987 491 aaPredicted RBP13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 SPP2Q13103 211 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 ALX1Q15699 326 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 ZYXQ15942 572 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 ZNF697Q5TEC3 545 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 C12orf60Q5U649 245 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 TRIM34Q9BYJ4 488 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 PICK1Q9NRD5 415 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 HERC5Q9UII4 1024 aaKnown RBP13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 SERPINB13Q9UIV8 391 aa13.72□□□□□ -0.21
CCDC90B-210ENST00000528149 PFASO15067 1338 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 A0A0G2JLL6 359 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 CTDSPL2Q05D32 466 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 PPARAQ07869 468 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 MTMR2Q13614 643 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 SEPT2Q15019 361 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 SBK1Q52WX2 424 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 KIAA1755Q5JYT7 1200 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 TATDN1Q6P1N9 297 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 PRRT2Q7Z6L0 340 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 TTC6Q86TZ1 520 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 SYMPKQ92797 1274 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 EHD4Q9H223 541 aa13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
CCDC90B-210ENST00000528149 NCOR1O75376 2440 aa13.71□□□□□ -0.22
CCDC90B-210ENST00000528149 A0A1W2PRG0 241 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 PRDM1O75626 825 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 CDK8P49336 464 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 SIAH1Q8IUQ4 282 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 TBC1D10CQ8IV04 446 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 FOXP4Q8IVH2 680 aaPredicted RBP13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 FAM122AQ96E09 287 aa13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC90B-210ENST00000528149 TNFRSF10AO00220 468 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 REC8O95072 547 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 RAB3GAP1Q15042 981 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 CERKLQ49MI3 558 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 MAP4K1Q92918 833 aa13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-210ENST00000528149 USP17L5A8MUK1 530 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms