RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 USP17L12C9JPN9 530 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 USP17L21D6R901 530 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 PRKAB2O43741 272 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 COL6A1P12109 1028 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 GNAT2P19087 354 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 RGS2P41220 211 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 RAB3GAP1Q15042 981 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 CATSPERGQ6ZRH7 1159 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 Q7L0L9 218 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 LBHD1Q9BQE6 289 aaPredicted RBP13.35□□□□□ -0.27
NR1H3-230ENST00000527949 RBPJLQ9UBG7 517 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
NR1H3-230ENST00000527949 ROBO3Q96MS0 1386 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 COL6A3P12111 3177 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 MSCO60682 206 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 VCAM1P19320 739 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 CYP2B6P20813 491 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 CDK8P49336 464 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 ERVK-9P63128 1117 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 ERVK-24P63145 666 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 SEPT2Q15019 361 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.34□□□□□ -0.27
NR1H3-230ENST00000527949 ACER1Q8TDN7 264 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 LPAR1Q92633 364 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 OSBP2Q969R2 916 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 SH2D4AQ9H788 454 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 TXNRD2Q9NNW7 524 aa13.34□□□□□ -0.27
NR1H3-230ENST00000527949 GSG1L2A8MUP6 293 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 CYP2D6P10635 497 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 MX1P20591 662 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 CCNA1P78396 465 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 TRIM32Q13049 653 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 SLFNL1Q499Z3 407 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 CTR9Q6PD62 1173 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 APBA2Q99767 749 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 CWC22Q9HCG8 908 aaKnown RBP13.33□□□□□ -0.28
NR1H3-230ENST00000527949 PRKAG2Q9UGJ0 569 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 PLXNB2O15031 1838 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 PFASO15067 1338 aa13.33□□□□□ -0.28
NR1H3-230ENST00000527949 GREB1LQ9C091 1923 aaPredicted RBP13.33□□□□□ -0.28
NR1H3-230ENST00000527949 A0A1W2PRG0 241 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 POTEB2H3BUK9 544 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 CHGBP05060 677 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 EVX2Q03828 476 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 CACNB2Q08289 660 aaPredicted RBP13.32□□□□□ -0.28
NR1H3-230ENST00000527949 POTEEQ6S8J3 1075 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 USP6NLQ92738 828 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 DYNLL2Q96FJ2 89 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 COL25A1Q9BXS0 654 aaPredicted RBP13.32□□□□□ -0.28
NR1H3-230ENST00000527949 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 KANSL2Q9H9L4 492 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 ARHGEF10LQ9HCE6 1279 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
NR1H3-230ENST00000527949 RLFQ13129 1914 aa13.32□□□□□ -0.28
NR1H3-230ENST00000527949 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 GPAA1O43292 621 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 ICA1Q05084 483 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 ZMYM1Q5SVZ6 1142 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 ZNF697Q5TEC3 545 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 MFSD14CQ5VZR4 134 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 LHX8Q68G74 356 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 PLEKHH3Q7Z736 793 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 SIAH1Q8IUQ4 282 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 VCPKMTQ9H867 229 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 ZNF287Q9HBT7 754 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
NR1H3-230ENST00000527949 A0A0G2JMZ2 1700 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 CUL9Q8IWT3 2517 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 PATL2C9JE40 543 aaKnown RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 MPHOSPH10O00566 681 aaKnown RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 CNMDO75829 334 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 AKR1B1P15121 316 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 MDM2Q00987 491 aaPredicted RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 COG2Q14746 738 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 Q3C1V9 767 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 MORN1Q5T089 497 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 ANKRD45Q5TZF3 282 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 TSHZ3Q63HK5 1081 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 GPR142Q7Z601 462 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 SHCBP1Q8NEM2 672 aa13.3□□□□□ -0.28
NR1H3-230ENST00000527949 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
NR1H3-230ENST00000527949 CYP2D7A0A087X1C5 515 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 SLC15A5A6NIM6 579 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 HOXC6P09630 235 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 PDE1AP54750 535 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 MAP2K5Q13163 448 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 ZYXQ15942 572 aaKnown RBP13.29□□□□□ -0.28
NR1H3-230ENST00000527949 OTUD7AQ8TE49 926 aaPredicted RBP13.29□□□□□ -0.28
NR1H3-230ENST00000527949 EVI5LQ96CN4 794 aa13.29□□□□□ -0.28
NR1H3-230ENST00000527949 FSD1Q9BTV5 496 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms