RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 IGSF3O75054 1194 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 ECM2O94769 699 aaPredicted RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 CHRNA5P30532 468 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 PDE4DQ08499 809 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 HSP90AA2PQ14568 343 aaPredicted RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 IQCEQ6IPM2 695 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 ZNF512BQ96KM6 892 aaPredicted RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 TTC14Q96N46 770 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
USP47-207ENST00000527733 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
USP47-207ENST00000527733 ALAS1P13196 640 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 NEK8Q86SG6 692 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 LUZP1Q86V48 1076 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 FLOT1O75955 427 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 CCDC186Q7Z3E2 898 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 SMCR8Q8TEV9 937 aaPredicted RBP16.96■□□□□ 0.31
USP47-207ENST00000527733 CABP7Q86V35 215 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 PRM3Q9NNZ6 103 aa16.96■□□□□ 0.31
USP47-207ENST00000527733 CNNM4Q6P4Q7 775 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 TBC1D10CQ8IV04 446 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 LARGE1O95461 756 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 SPICE1Q8N0Z3 855 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 FOXP1Q9H334 677 aaPredicted RBP16.95■□□□□ 0.3
USP47-207ENST00000527733 GOLGA6L9A6NEM1 432 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 AKR1B10O60218 316 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 RPL13P26373 211 aaKnown RBP16.95■□□□□ 0.3
USP47-207ENST00000527733 MLKLQ8NB16 471 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 SUGT1Q9Y2Z0 365 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 GSG1L2A8MUP6 293 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 GCOM1H8Y6P7 765 aaPredicted RBP16.95■□□□□ 0.3
USP47-207ENST00000527733 CCDC172P0C7W6 258 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 POLR2MP0CAP2 368 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 SLC15A2Q16348 729 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 KIF4BQ2VIQ3 1234 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 GPHNQ9NQX3 736 aaPredicted RBP16.95■□□□□ 0.3
USP47-207ENST00000527733 DNM3Q9UQ16 869 aa16.95■□□□□ 0.3
USP47-207ENST00000527733 PNPLA7Q6ZV29 1317 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 FOSP01100 380 aaPredicted RBP16.94■□□□□ 0.3
USP47-207ENST00000527733 CYP2D6P10635 497 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 PABPC4Q13310 644 aaKnown RBP eCLIP16.94■□□□□ 0.34e-15■□□□□ 10.3
USP47-207ENST00000527733 MTA3Q9BTC8 594 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 ARHGEF35A5YM69 484 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
USP47-207ENST00000527733 CACNB3P54284 484 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
USP47-207ENST00000527733 CDR1P51861 262 aa16.94■□□□□ 0.3
USP47-207ENST00000527733 TDRD3Q9H7E2 651 aaKnown RBP16.94■□□□□ 0.3
USP47-207ENST00000527733 BMP3P12645 472 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 CETN2P41208 172 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 ZNF445P59923 1031 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 POSTNQ15063 836 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 MCF2L2Q86YR7 1114 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 IFNKQ9P0W0 207 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 CMA1P23946 247 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 NT5C3AQ9H0P0 336 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 WDR19Q8NEZ3 1342 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 PFKFB1P16118 471 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 TRAPPC10P48553 1259 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 USP14P54578 494 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 USP17L2Q6R6M4 530 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 KCTD1Q719H9 257 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 VTI1AQ96AJ9 217 aa16.93■□□□□ 0.3
USP47-207ENST00000527733 NSUN4Q96CB9 384 aaKnown RBP16.93■□□□□ 0.3
USP47-207ENST00000527733 PRPF3O43395 683 aaKnown RBP16.92■□□□□ 0.3
USP47-207ENST00000527733 GYS1P13807 737 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 RTEL1Q9NZ71 1219 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 TRAF5O00463 557 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 OR52Z1P0C646 297 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 SKILP12757 684 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 TMEM179Q6ZVK1 233 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 PAGR1Q9BTK6 254 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 PCDHA12Q9UN75 941 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 hCG_1984214I3L0E3 225 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 DDX39AO00148 427 aaKnown RBP16.92■□□□□ 0.3
USP47-207ENST00000527733 GAS7O60861 476 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 URI1O94763 535 aaPredicted RBP16.92■□□□□ 0.3
USP47-207ENST00000527733 ERLIN2O94905 339 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 TNNT1P13805 278 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 TOB2Q14106 344 aaPredicted RBP16.92■□□□□ 0.3
USP47-207ENST00000527733 ZNF713Q8N859 430 aaPredicted RBP16.92■□□□□ 0.3
USP47-207ENST00000527733 TMEM63CQ9P1W3 806 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 CCPG1Q9ULG6 757 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 PCDHA7Q9UN72 937 aa16.92■□□□□ 0.3
USP47-207ENST00000527733 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 UIMC1Q96RL1 719 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 NOP56O00567 594 aaKnown RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 PHACTR2O75167 634 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 NCBP1Q09161 790 aaKnown RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 HERC4Q5GLZ8 1057 aaPredicted RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 MIGA2Q7L4E1 593 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 UBXN4Q92575 508 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 PTGDRQ13258 359 aa16.91■□□□□ 0.3
USP47-207ENST00000527733 EZH2Q15910 746 aaKnown RBP16.91■□□□□ 0.3
USP47-207ENST00000527733 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms