RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 PTPN22Q9Y2R2 807 aa13.33□□□□□ -0.28
CTSB-214ENST00000527243 GNRH1P01148 92 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
CTSB-214ENST00000527243 PSMC4P43686 418 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 ZNF444Q8N0Y2 327 aaPredicted RBP13.32□□□□□ -0.28
CTSB-214ENST00000527243 ANKRD13CQ8N6S4 541 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 MKL1Q969V6 931 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 CEP95Q96GE4 821 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 RPAP3Q9H6T3 665 aaPredicted RBP13.32□□□□□ -0.28
CTSB-214ENST00000527243 SH2D4AQ9H788 454 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 MTMR4Q9NYA4 1195 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 SYNPO2Q9UMS6 1093 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 HPS5Q9UPZ3 1129 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 ZSWIM8A7E2V4 1837 aa13.32□□□□□ -0.28
CTSB-214ENST00000527243 SPDYE16A6NNV3 312 aaPredicted RBP13.31□□□□□ -0.28
CTSB-214ENST00000527243 SGSM2O43147 1006 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 CNMDO75829 334 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 TFAP4Q01664 338 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 KIF22Q14807 665 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 ARHGEF6Q15052 776 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 BMP2KLQ5H9B9 411 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 FAM47AQ5JRC9 791 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 TBC1D10CQ8IV04 446 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
CTSB-214ENST00000527243 STAG1Q8WVM7 1258 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 MYH8P13535 1937 aa13.31□□□□□ -0.28
CTSB-214ENST00000527243 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
CTSB-214ENST00000527243 PEX10O60683 326 aa13.3□□□□□ -0.28
CTSB-214ENST00000527243 PCP11498 1178 aaKnown RBP13.3□□□□□ -0.28
CTSB-214ENST00000527243 PRMT2P55345 433 aa13.3□□□□□ -0.28
CTSB-214ENST00000527243 IL17RBQ9NRM6 502 aa13.3□□□□□ -0.28
CTSB-214ENST00000527243 SRRDQ9UH36 339 aa13.3□□□□□ -0.28
CTSB-214ENST00000527243 RLFQ13129 1914 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 TTLL1O95922 423 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 FCGRTP55899 365 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 HAND2P61296 217 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 ERVK-9P63128 1117 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 ERVK-24P63145 666 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 PTH1RQ03431 593 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 Q3C1V9 767 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 AKNAD1Q5T1N1 836 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 RUFY2Q8WXA3 655 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 ARMC5Q96C12 935 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 TCP11L1Q9NUJ3 509 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 PTCH2Q9Y6C5 1203 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 MYPNQ86TC9 1320 aa13.29□□□□□ -0.28
CTSB-214ENST00000527243 F5H6K3 240 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 FMNL1O95466 1100 aaPredicted RBP13.28□□□□□ -0.28
CTSB-214ENST00000527243 NDUFB10O96000 172 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 DSG3P32926 999 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 ATP2B2Q01814 1243 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 KLRC3Q07444 240 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 COG2Q14746 738 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 GMCL1P1Q8NEA9 526 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 GPRC5AQ8NFJ5 357 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 GOPCQ9HD26 462 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 GJD2Q9UKL4 321 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
CTSB-214ENST00000527243 TSPY2A6NKD2 308 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 ZNF213O14771 459 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 NMT2O60551 498 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 HOXD10P28358 340 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 NT5C2P49902 561 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 PRKCZQ05513 592 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 PORCNQ9H237 461 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 FBXO28Q9NVF7 368 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 HOXC10Q9NYD6 342 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 CTNNA3Q9UI47 895 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 GABRQQ9UN88 632 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 NEDD4P46934 1319 aa13.27□□□□□ -0.29
CTSB-214ENST00000527243 A0A0G2JMZ2 1700 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 TNPO2O14787 897 aaKnown RBP13.26□□□□□ -0.29
CTSB-214ENST00000527243 RANBP6O60518 1105 aaKnown RBP13.26□□□□□ -0.29
CTSB-214ENST00000527243 ECM2O94769 699 aaPredicted RBP13.26□□□□□ -0.29
CTSB-214ENST00000527243 FLT3LGP49771 235 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 IRF5Q13568 498 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 LAMA4Q16363 1823 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 PPP4R3BQ5MIZ7 849 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 FAM83BQ5T0W9 1011 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 RCSD1Q6JBY9 416 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 MFSD6Q6ZSS7 791 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 LRRC47Q8N1G4 583 aaKnown RBP13.26□□□□□ -0.29
CTSB-214ENST00000527243 MB21D1Q8N884 522 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 MAP4K1Q92918 833 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 ATG4CQ96DT6 458 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 ESYT1Q9BSJ8 1104 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 PAGR1Q9BTK6 254 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 TANGO6Q9C0B7 1094 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 RNF41Q9H4P4 317 aaPredicted RBP13.26□□□□□ -0.29
CTSB-214ENST00000527243 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
CTSB-214ENST00000527243 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
CTSB-214ENST00000527243 FLOT1O75955 427 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms