RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 PRAMEF19Q5SWL8 479 aa15.86■□□□□ 0.13
CLNS1A-207ENST00000527133 TTC6Q86TZ1 520 aa15.86■□□□□ 0.13
CLNS1A-207ENST00000527133 MAGEB6Q8N7X4 407 aa15.86■□□□□ 0.13
CLNS1A-207ENST00000527133 TRIM43Q96BQ3 446 aaPredicted RBP15.86■□□□□ 0.13
CLNS1A-207ENST00000527133 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
CLNS1A-207ENST00000527133 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 STRNO43815 780 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 COBLO75128 1261 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 ERCC3P19447 782 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 GUCY1A2P33402 732 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 PLCD1P51178 756 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 SEPT2Q15019 361 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 CERS3Q8IU89 383 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 TANGO6Q9C0B7 1094 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 SPATC1LQ9H0A9 340 aa15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 DBNLQ9UJU6 430 aaKnown RBP15.85■□□□□ 0.13
CLNS1A-207ENST00000527133 IPO8O15397 1037 aaKnown RBP15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 SURF6O75683 361 aaKnown RBP15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 TLE2Q04725 743 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 POLA2Q14181 598 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 COG2Q14746 738 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 LRRC41Q15345 812 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 FAM47AQ5JRC9 791 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 CCDC8Q9H0W5 538 aaPredicted RBP15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 HOXC10Q9NYD6 342 aa15.84■□□□□ 0.13
CLNS1A-207ENST00000527133 A0A1W2PRG0 241 aa15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 MPHOSPH10O00566 681 aaKnown RBP15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 PLS1Q14651 629 aa15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 RNPC3Q96LT9 517 aaKnown RBP15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 SLC5A4Q9NY91 659 aa15.83■□□□□ 0.12
CLNS1A-207ENST00000527133 BCAR3O75815 825 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 POLR3DP05423 398 aaPredicted RBP15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 ITGB8P26012 769 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 EPHB4P54760 987 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 C1orf53Q5VUE5 145 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 NCAPG2Q86XI2 1143 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 SSH3Q8TE77 659 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 SYMPKQ92797 1274 aaKnown RBP15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 ANTXR1Q9H6X2 564 aa15.82■□□□□ 0.12
CLNS1A-207ENST00000527133 A0A0G2JMZ2 1700 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 EVX2Q03828 476 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 MAP3K12Q12852 859 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 MAML3Q96JK9 1138 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 MROH8Q9H579 483 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
CLNS1A-207ENST00000527133 TMEM265A0A087WTH1 108 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 CLTBP09497 229 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 RARBP10826 455 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 ATP8B2P98198 1209 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 GABPAQ06546 454 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 KIAA1755Q5JYT7 1200 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 ABRAQ8N0Z2 381 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 TMEM57Q8N5G2 664 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 MB21D1Q8N884 522 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 EAF2Q96CJ1 260 aaPredicted RBP15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 RIOK1Q9BRS2 568 aaKnown RBP15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 PHF24Q9UPV7 400 aa15.8■□□□□ 0.12
CLNS1A-207ENST00000527133 MAGEB6P1A0A0J9YX57 407 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 PQBP1O60828 265 aaKnown RBP15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 FLOT1O75955 427 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 PGK1P00558 417 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 FCER1AP12319 257 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 RAG1P15918 1043 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 DSG3P32926 999 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 GRIN2CQ14957 1233 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 SPICE1Q8N0Z3 855 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 USP38Q8NB14 1042 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 MCM9Q9NXL9 1143 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 NAV1Q8NEY1 1877 aa15.79■□□□□ 0.12
CLNS1A-207ENST00000527133 KIAA0355O15063 1070 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 FPGSQ05932 587 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 TMEM179Q6ZVK1 233 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 RNF180Q86T96 592 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 CLEC10AQ8IUN9 316 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 SLC44A5Q8NCS7 719 aa15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 CRNKL1Q9BZJ0 848 aaKnown RBP15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 NOP58Q9Y2X3 529 aaKnown RBP15.78■□□□□ 0.12
CLNS1A-207ENST00000527133 A0A1W2PQ45 241 aaPredicted RBP15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 A0A1W2PQY0 241 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 PGK2P07205 417 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 CYP2D6P10635 497 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 DNAJB2P25686 324 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 TJAP1Q5JTD0 557 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 TMED8Q6PL24 325 aaPredicted RBP15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 MMP19Q99542 508 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 TMEM39AQ9NV64 488 aa15.77■□□□□ 0.12
CLNS1A-207ENST00000527133 SMCHD1A6NHR9 2005 aa15.77■□□□□ 0.11
CLNS1A-207ENST00000527133 TAL1P17542 331 aaPredicted RBP15.76■□□□□ 0.11
CLNS1A-207ENST00000527133 TMEM132BQ14DG7 1078 aa15.76■□□□□ 0.11
CLNS1A-207ENST00000527133 SDR42E1Q8WUS8 393 aa15.76■□□□□ 0.11
CLNS1A-207ENST00000527133 LENG1Q96BZ8 264 aaPredicted RBP15.76■□□□□ 0.11
CLNS1A-207ENST00000527133 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
CLNS1A-207ENST00000527133 NRBP1Q9UHY1 535 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms