RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 USP48Q86UV5 1035 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 CREG2Q8IUH2 290 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 POU5F2Q8N7G0 328 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 NKD1Q969G9 470 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 TRIT1Q9H3H1 467 aaKnown RBP9.03□□□□□ -0.96
COPB1-203ENST00000525214 ANTXR1Q9H6X2 564 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
COPB1-203ENST00000525214 SHISA3A0PJX4 238 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 RAG1P15918 1043 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 VAMP1P23763 118 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 GBP1P32455 592 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 GDNFP39905 211 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 ZSWIM9Q86XI8 627 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 GPATCH2Q9NW75 528 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
COPB1-203ENST00000525214 ZNF503-AS2A6NEH8 195 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 MCM4P33991 863 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 LCE3BQ5TA77 95 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 KRTAP1-3Q8IUG1 177 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 TMEM40Q8WWA1 233 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.01□□□□□ -0.97
COPB1-203ENST00000525214 DUSP13Q9UII6 198 aa9.01□□□□□ -0.97
COPB1-203ENST00000525214 MEIS3P2A8K0S8 358 aa9□□□□□ -0.97
COPB1-203ENST00000525214 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9□□□□□ -0.97
COPB1-203ENST00000525214 AFMP43652 599 aa9□□□□□ -0.97
COPB1-203ENST00000525214 ZNF165P49910 485 aa9□□□□□ -0.97
COPB1-203ENST00000525214 RACK1P63244 317 aaKnown RBP9□□□□□ -0.97
COPB1-203ENST00000525214 NLRC3Q7RTR2 1065 aa9□□□□□ -0.97
COPB1-203ENST00000525214 ADAMTS10Q9H324 1103 aa9□□□□□ -0.97
COPB1-203ENST00000525214 EGR3Q06889 387 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 RNF34Q969K3 372 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 TMEM59LQ9UK28 342 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 PCDHA11Q9Y5I1 949 aa8.99□□□□□ -0.97
COPB1-203ENST00000525214 NME1P15531 152 aaKnown RBP8.98□□□□□ -0.97
COPB1-203ENST00000525214 ERVFC1P60507 584 aa8.98□□□□□ -0.97
COPB1-203ENST00000525214 NBPF12Q5TAG4 269 aaPredicted RBP8.98□□□□□ -0.97
COPB1-203ENST00000525214 METTL16Q86W50 562 aaKnown RBP8.98□□□□□ -0.97
COPB1-203ENST00000525214 KIRREL1Q96J84 757 aa8.98□□□□□ -0.97
COPB1-203ENST00000525214 DDX41Q9UJV9 622 aaKnown RBP8.98□□□□□ -0.97
COPB1-203ENST00000525214 SCAMP3O14828 347 aaKnown RBP8.97□□□□□ -0.97
COPB1-203ENST00000525214 CCDC120Q96HB5 630 aa8.97□□□□□ -0.97
COPB1-203ENST00000525214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.97□□□□□ -0.97
COPB1-203ENST00000525214 TNFRSF10CO14798 259 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 LTKP29376 864 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 HK2P52789 917 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 RNF4P78317 190 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 SNW1Q13573 536 aaKnown RBP8.96□□□□□ -0.98
COPB1-203ENST00000525214 ZNF648Q5T619 568 aaPredicted RBP8.96□□□□□ -0.98
COPB1-203ENST00000525214 LIN37Q96GY3 246 aaPredicted RBP8.96□□□□□ -0.98
COPB1-203ENST00000525214 SP110Q9HB58 689 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 KIAA1522Q9P206 1035 aaPredicted RBP8.96□□□□□ -0.98
COPB1-203ENST00000525214 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.98
COPB1-203ENST00000525214 UNCXA6NJT0 531 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 GLI1P08151 1106 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 ZGLP1P0C6A0 271 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 CCNFP41002 786 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 NMIQ13287 307 aaPredicted RBP8.95□□□□□ -0.98
COPB1-203ENST00000525214 LRRFIP1Q32MZ4 808 aaKnown RBP8.95□□□□□ -0.98
COPB1-203ENST00000525214 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 TMC3Q7Z5M5 1100 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 TMEM192Q8IY95 271 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 ZNF512BQ96KM6 892 aaPredicted RBP8.95□□□□□ -0.98
COPB1-203ENST00000525214 SLC9A7Q96T83 725 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 HDAC8Q9BY41 377 aa8.95□□□□□ -0.98
COPB1-203ENST00000525214 HPXP02790 462 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 C8AP07357 584 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 ACRP10323 421 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 TEKQ02763 1124 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 RGS22Q8NE09 1264 aa8.94□□□□□ -0.98
COPB1-203ENST00000525214 MRRFQ96E11 262 aaKnown RBP8.94□□□□□ -0.98
COPB1-203ENST00000525214 CLEC3AO75596 197 aa8.93□□□□□ -0.98
COPB1-203ENST00000525214 RAD51AP2Q09MP3 1159 aa8.93□□□□□ -0.98
COPB1-203ENST00000525214 MESP2Q0VG99 397 aa8.93□□□□□ -0.98
COPB1-203ENST00000525214 SYTL5Q8TDW5 730 aaPredicted RBP8.93□□□□□ -0.98
COPB1-203ENST00000525214 EBF1Q9UH73 591 aa8.93□□□□□ -0.98
COPB1-203ENST00000525214 ZNF281Q9Y2X9 895 aa8.93□□□□□ -0.98
COPB1-203ENST00000525214 LRRC10BA6NIK2 292 aa8.92□□□□□ -0.98
COPB1-203ENST00000525214 YBX3P16989 372 aaKnown RBP eCLIP8.92□□□□□ -0.984e-10■□□□□ 10.5
COPB1-203ENST00000525214 TRHRP34981 398 aaPredicted RBP8.92□□□□□ -0.98
COPB1-203ENST00000525214 CLEC16AQ2KHT3 1053 aa8.92□□□□□ -0.98
COPB1-203ENST00000525214 TMEM67Q5HYA8 995 aa8.92□□□□□ -0.98
COPB1-203ENST00000525214 ENOX1Q8TC92 643 aaKnown RBP8.92□□□□□ -0.98
COPB1-203ENST00000525214 SLC6A18Q96N87 628 aa8.92□□□□□ -0.98
COPB1-203ENST00000525214 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
COPB1-203ENST00000525214 MLANAQ16655 118 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 USHBP1Q8N6Y0 703 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 DAGLBQ8NCG7 672 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 ABHD4Q8TB40 342 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 PRDM14Q9GZV8 571 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 FAM53CQ9NYF3 392 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 PPT2Q9UMR5 302 aa8.91□□□□□ -0.98
COPB1-203ENST00000525214 FARP2O94887 1054 aaPredicted RBP8.9□□□□□ -0.98
COPB1-203ENST00000525214 PRAMEF1O95521 474 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 RAC2P15153 192 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 PAK2Q13177 524 aa8.9□□□□□ -0.98
COPB1-203ENST00000525214 PRR23BQ6ZRT6 265 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms