RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 PDE4AP27815 886 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 ERVK-9P63128 1117 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 ERVK-24P63145 666 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 PPARAQ07869 468 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 SAMD1Q6SPF0 538 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 ZNF444Q8N0Y2 327 aaPredicted RBP15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 PORCNQ9H237 461 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 OSBPL3Q9H4L5 887 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 ROBO3Q96MS0 1386 aa15.32■□□□□ 0.04
TRAPPC4-205ENST00000525079 DOCK3Q8IZD9 2030 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 SPDYE16A6NNV3 312 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 CTDSPL2Q05D32 466 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 CCAR1Q8IX12 1150 aaKnown RBP15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 SLAIN1Q8ND83 568 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 INCENPQ9NQS7 918 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 BTBD7Q9P203 1132 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 GJD2Q9UKL4 321 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 RABGAP1Q9Y3P9 1069 aa15.31■□□□□ 0.04
TRAPPC4-205ENST00000525079 HTTP42858 3142 aa15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 SDSP20132 328 aa15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 IRF5Q13568 498 aa15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 COG2Q14746 738 aa15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 FAM47AQ5JRC9 791 aa15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 GTF3C2Q8WUA4 911 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC4-205ENST00000525079 FLOT1O75955 427 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 SLC3A2P08195 630 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 CCL5P13501 91 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 CYP2B6P20813 491 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 PDE4BQ07343 736 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 WDR78Q5VTH9 848 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 LPAR1Q92633 364 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 ZNF287Q9HBT7 754 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 CLIP2Q9UDT6 1046 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 TACC3Q9Y6A5 838 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 GREB1LQ9C091 1923 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 PLXNB2O15031 1838 aa15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 RBBP6Q7Z6E9 1792 aaKnown RBP15.29■□□□□ 0.04
TRAPPC4-205ENST00000525079 IGKV6D-41A0A0C4DH26 115 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 WDR46O15213 610 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 INHAP05111 366 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 MAPK4P31152 587 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 UBXN2AP68543 259 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 TFAP4Q01664 338 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 CWC27Q6UX04 472 aaKnown RBP15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 LBX2Q6XYB7 198 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 GPR142Q7Z601 462 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 PLEKHH3Q7Z736 793 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 CEP95Q96GE4 821 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 NUP88Q99567 741 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 RNF208Q9H0X6 261 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 UNC93B1Q9H1C4 597 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 GOPCQ9HD26 462 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 HOXC10Q9NYD6 342 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 NYAP2Q9P242 653 aa15.28■□□□□ 0.04
TRAPPC4-205ENST00000525079 RLFQ13129 1914 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 CCDC171Q6TFL3 1326 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 FGAP02671 866 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 TSPY3P0CV98 308 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 TSPY8P0CW00 308 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 HSPD1P10809 573 aaKnown RBP15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 DSG3P32926 999 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 CCNA1P78396 465 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 ALX1Q15699 326 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 ATG4CQ96DT6 458 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 DIAPH3Q9NSV4 1193 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 FBXO28Q9NVF7 368 aa15.27■□□□□ 0.04
TRAPPC4-205ENST00000525079 F5H6K3 240 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 KLRC3Q07444 240 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 TRIM32Q13049 653 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 PLS1Q14651 629 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 TICAM2Q86XR7 235 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 LRRC47Q8N1G4 583 aaKnown RBP15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 NEDD1Q8NHV4 660 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 CHMP4CQ96CF2 233 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAPPC4-205ENST00000525079 MYH4Q9Y623 1939 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 NDUFB10O96000 172 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 GSPT1P15170 499 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 HAND2P61296 217 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 MORN1Q5T089 497 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 TTC22Q5TAA0 569 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 SOCS4Q8WXH5 440 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 TRIB2Q92519 343 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 MOV10L1Q9BXT6 1211 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 TOMM22Q9NS69 142 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 ANAPC4Q9UJX5 808 aa15.25■□□□□ 0.03
TRAPPC4-205ENST00000525079 PARP14Q460N5 1801 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 TSPY2A6NKD2 308 aa15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 TNRC18O15417 2968 aaPredicted RBP15.24■□□□□ 0.03
TRAPPC4-205ENST00000525079 NMT2O60551 498 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms