RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 USP17L12C9JPN9 530 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 USP17L21D6R901 530 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 ZKSCAN1P17029 563 aaPredicted RBP14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 CCND3P30281 292 aaPredicted RBP14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 RGS2P41220 211 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 CDK8P49336 464 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 WDR78Q5VTH9 848 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 C16orf86Q6ZW13 317 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 ECHDC1Q9NTX5 307 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 PCDH10Q9P2E7 1040 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 RBM27Q9P2N5 1060 aaKnown RBP14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 SWAP70Q9UH65 585 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 SLC4A4Q9Y6R1 1079 aa14.24□□□□□ -0.13
CLNS1A-202ENST00000525064 DNAH12Q6ZR08 3092 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 PTPREP23469 700 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 ICA1Q05084 483 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 MAP2K5Q13163 448 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 CTR9Q6PD62 1173 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 NPLOC4Q8TAT6 608 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 PRO3102Q9H379 93 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 OGDHLQ9ULD0 1010 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 PCDHB15Q9Y5E8 787 aa14.23□□□□□ -0.13
CLNS1A-202ENST00000525064 CCNA1P78396 465 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 GRB14Q14449 540 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 NECAB2Q7Z6G3 386 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 SPICE1Q8N0Z3 855 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 ANKLE1Q8NAG6 615 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 OSBP2Q969R2 916 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 MOV10L1Q9BXT6 1211 aaKnown RBP14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 TANGO6Q9C0B7 1094 aa14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
CLNS1A-202ENST00000525064 PFASO15067 1338 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 SMCHD1A6NHR9 2005 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 SLC15A5A6NIM6 579 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 EVI5O60447 810 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 LHX8Q68G74 356 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 ZSCAN25Q6NSZ9 544 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 TRMT44Q8IYL2 757 aaKnown RBP14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 STK11IPQ8N1F8 1099 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 KBTBD3Q8NAB2 608 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 OTUD7AQ8TE49 926 aaPredicted RBP14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 ATG4CQ96DT6 458 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 STRBPQ96SI9 672 aaKnown RBP14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 VCPKMTQ9H867 229 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 EPB41L4AQ9HCS5 686 aaPredicted RBP14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 TMX2Q9Y320 296 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 NR2E3Q9Y5X4 410 aa14.21□□□□□ -0.13
CLNS1A-202ENST00000525064 GSG1L2A8MUP6 293 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 M0R2C6 588 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 CAPN2P17655 700 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 DSG3P32926 999 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 COG2Q14746 738 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 SAMD1Q6SPF0 538 aaPredicted RBP14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 C7orf61Q8IZ16 206 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 SPATC1LQ9H0A9 340 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 C11orf49Q9H6J7 331 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 ARHGEF10LQ9HCE6 1279 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 ZMYND8Q9ULU4 1186 aaPredicted RBP14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 LAMA3Q16787 3333 aa14.2□□□□□ -0.14
CLNS1A-202ENST00000525064 IGHA2P01877 340 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 EEF2P13639 858 aaKnown RBP14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 ATP2B2Q01814 1243 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 AMOTL1Q8IY63 956 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 TRPV1Q8NER1 839 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 APPBP2Q92624 585 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 CCDC17Q96LX7 622 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 NBPF3Q9H094 633 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 FBXO28Q9NVF7 368 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 ARPP21Q9UBL0 812 aaPredicted RBP14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 IVNS1ABPQ9Y6Y0 642 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 ROBO3Q96MS0 1386 aa14.19□□□□□ -0.14
CLNS1A-202ENST00000525064 WDR46O15213 610 aaKnown RBP14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 RNF113AO15541 343 aaKnown RBP14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 GPAA1O43292 621 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 COBLO75128 1261 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 FLOT1O75955 427 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 GLRX3O76003 335 aaKnown RBP14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 HOXC6P09630 235 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 ERCC3P19447 782 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 RASA1P20936 1047 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 ADORA2AP29274 412 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 CYP2C19P33261 490 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 RRP1P56182 461 aaKnown RBP14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 SBK1Q52WX2 424 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 PI4K2BQ8TCG2 481 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 LPAR1Q92633 364 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 DDRGK1Q96HY6 314 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 GPATCH3Q96I76 525 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 SEC62Q99442 399 aaKnown RBP14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 HOXC10Q9NYD6 342 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 STAP2Q9UGK3 403 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 MCM3APO60318 1980 aa14.18□□□□□ -0.14
CLNS1A-202ENST00000525064 MINDY4BA8MYZ0 360 aa14.17□□□□□ -0.14
CLNS1A-202ENST00000525064 COL6A1P12109 1028 aa14.17□□□□□ -0.14
CLNS1A-202ENST00000525064 SYN1P17600 705 aa14.17□□□□□ -0.14
CLNS1A-202ENST00000525064 PLS1Q14651 629 aa14.17□□□□□ -0.14
CLNS1A-202ENST00000525064 TMEM132BQ14DG7 1078 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms