RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 ZMYND8Q9ULU4 1186 aaPredicted RBP19.63■□□□□ 0.73
HIF3A-208ENST00000524533 RLFQ13129 1914 aa19.63■□□□□ 0.73
HIF3A-208ENST00000524533 PFASO15067 1338 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 PRKAB2O43741 272 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 GRB14Q14449 540 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 SLFNL1Q499Z3 407 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 MFSD14CQ5VZR4 134 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 AMOTL1Q8IY63 956 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 DYNLL2Q96FJ2 89 aa19.62■□□□□ 0.73
HIF3A-208ENST00000524533 PARP14Q460N5 1801 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 COG2Q14746 738 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 LHX8Q68G74 356 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 LRRCC1Q9C099 1032 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 ARHGEF10LQ9HCE6 1279 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 FLRT1Q9NZU1 646 aa19.61■□□□□ 0.73
HIF3A-208ENST00000524533 HOXC6P09630 235 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 COL6A1P12109 1028 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 AKR1B1P15121 316 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 SYN1P17600 705 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 ICA1Q05084 483 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 UBE3CQ15386 1083 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 CLEC10AQ8IUN9 316 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 GDF15Q99988 308 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 SH2D4AQ9H788 454 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 HOXC10Q9NYD6 342 aa19.6■□□□□ 0.73
HIF3A-208ENST00000524533 ATP2B2Q01814 1243 aa19.59■□□□□ 0.73
HIF3A-208ENST00000524533 ZSCAN25Q6NSZ9 544 aa19.59■□□□□ 0.73
HIF3A-208ENST00000524533 LPAR1Q92633 364 aa19.59■□□□□ 0.73
HIF3A-208ENST00000524533 MOV10L1Q9BXT6 1211 aaKnown RBP19.59■□□□□ 0.73
HIF3A-208ENST00000524533 CYP2D7A0A087X1C5 515 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 CHGBP05060 677 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 BMP8BP34820 402 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 KIAA1755Q5JYT7 1200 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 C20orf194Q5TEA3 1177 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 C12orf60Q5U649 245 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 NPLOC4Q8TAT6 608 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 CCDC17Q96LX7 622 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 SPATC1LQ9H0A9 340 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 TMX2Q9Y320 296 aa19.58■□□□□ 0.72
HIF3A-208ENST00000524533 USP17L12C9JPN9 530 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 USP17L21D6R901 530 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 SOX1O00570 391 aaPredicted RBP19.57■□□□□ 0.72
HIF3A-208ENST00000524533 SMARCA5O60264 1052 aaPredicted RBP19.57■□□□□ 0.72
HIF3A-208ENST00000524533 MSCO60682 206 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 FLOT1O75955 427 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 ADORA2AP29274 412 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 CNGA1P29973 690 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 CYP2C19P33261 490 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 CDK8P49336 464 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 C16orf86Q6ZW13 317 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 DPP9Q86TI2 863 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 SPICE1Q8N0Z3 855 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 MB21D1Q8N884 522 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 SHCBP1Q8NEM2 672 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 VCPKMTQ9H867 229 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 DDX20Q9UHI6 824 aaKnown RBP19.57■□□□□ 0.72
HIF3A-208ENST00000524533 SLC4A4Q9Y6R1 1079 aa19.57■□□□□ 0.72
HIF3A-208ENST00000524533 COL11A1P12107 1806 aaPredicted RBP19.56■□□□□ 0.72
HIF3A-208ENST00000524533 SMIM22K7EJ46 135 aa19.56■□□□□ 0.72
HIF3A-208ENST00000524533 WDR46O15213 610 aaKnown RBP19.56■□□□□ 0.72
HIF3A-208ENST00000524533 STRNO43815 780 aa19.56■□□□□ 0.72
HIF3A-208ENST00000524533 DSG3P32926 999 aa19.56■□□□□ 0.72
HIF3A-208ENST00000524533 PLS1Q14651 629 aa19.56■□□□□ 0.72
HIF3A-208ENST00000524533 SIAH1Q8IUQ4 282 aa19.56■□□□□ 0.72
HIF3A-208ENST00000524533 ERCC3P19447 782 aa19.55■□□□□ 0.72
HIF3A-208ENST00000524533 MAGEA10P43363 369 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-208ENST00000524533 LRRC26Q2I0M4 334 aa19.55■□□□□ 0.72
HIF3A-208ENST00000524533 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-208ENST00000524533 ATG4CQ96DT6 458 aa19.55■□□□□ 0.72
HIF3A-208ENST00000524533 LRCH3Q96II8 777 aa19.55■□□□□ 0.72
HIF3A-208ENST00000524533 PUS7LQ9H0K6 701 aaKnown RBP19.55■□□□□ 0.72
HIF3A-208ENST00000524533 ECHDC1Q9NTX5 307 aa19.55■□□□□ 0.72
HIF3A-208ENST00000524533 ARPP21Q9UBL0 812 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-208ENST00000524533 GREB1LQ9C091 1923 aaPredicted RBP19.55■□□□□ 0.72
HIF3A-208ENST00000524533 CYBAP13498 195 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 OLFML2BQ68BL8 750 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 CTR9Q6PD62 1173 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 NCAPG2Q86XI2 1143 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 TRPV1Q8NER1 839 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 MROH8Q9H579 483 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 LAMA3Q16787 3333 aa19.54■□□□□ 0.72
HIF3A-208ENST00000524533 EEF2P13639 858 aaKnown RBP19.53■□□□□ 0.72
HIF3A-208ENST00000524533 GPATCH3Q96I76 525 aa19.53■□□□□ 0.72
HIF3A-208ENST00000524533 SENP6Q9GZR1 1112 aaPredicted RBP19.53■□□□□ 0.72
HIF3A-208ENST00000524533 KANSL2Q9H9L4 492 aa19.53■□□□□ 0.72
HIF3A-208ENST00000524533 SLC5A4Q9NY91 659 aa19.53■□□□□ 0.72
HIF3A-208ENST00000524533 IGHA2P01877 340 aa19.52■□□□□ 0.72
HIF3A-208ENST00000524533 TDHQ8IZJ6 230 aa19.52■□□□□ 0.72
HIF3A-208ENST00000524533 ABRAQ8N0Z2 381 aa19.52■□□□□ 0.72
HIF3A-208ENST00000524533 UBE2OQ9C0C9 1292 aaKnown RBP19.52■□□□□ 0.72
HIF3A-208ENST00000524533 GOPCQ9HD26 462 aa19.52■□□□□ 0.72
HIF3A-208ENST00000524533 DNM1LO00429 736 aa19.51■□□□□ 0.71
HIF3A-208ENST00000524533 RAD21O60216 631 aa19.51■□□□□ 0.71
HIF3A-208ENST00000524533 COBLO75128 1261 aa19.51■□□□□ 0.71
HIF3A-208ENST00000524533 ROBO3Q96MS0 1386 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 DNAH12Q6ZR08 3092 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 SLC25A27O95847 323 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 FCER1AP12319 257 aa19.5■□□□□ 0.71
HIF3A-208ENST00000524533 TMEM132BQ14DG7 1078 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms