RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 LBX2Q6XYB7 198 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 RUFY2Q8WXA3 655 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 FEZ1Q99689 392 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 LSG1Q9H089 658 aaKnown RBP14.19□□□□□ -0.14
CLN8-207ENST00000524258 RPAP3Q9H6T3 665 aaPredicted RBP14.19□□□□□ -0.14
CLN8-207ENST00000524258 ARHGEF10LQ9HCE6 1279 aa14.19□□□□□ -0.14
CLN8-207ENST00000524258 NEDD4P46934 1319 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 MYH8P13535 1937 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 RLFQ13129 1914 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 OSBPP22059 807 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 FAM110CQ1W6H9 321 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 Q3C1V9 767 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 RCSD1Q6JBY9 416 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 TNS4Q8IZW8 715 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 LPAR1Q92633 364 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 ERO1AQ96HE7 468 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 TRIM47Q96LD4 638 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 TCP11L1Q9NUJ3 509 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 CLIP2Q9UDT6 1046 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 PNMA3Q9UL41 463 aa14.18□□□□□ -0.14
CLN8-207ENST00000524258 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
CLN8-207ENST00000524258 ZNF213O14771 459 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 CYP21A2P08686 494 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 TSPY3P0CV98 308 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 TSPY8P0CW00 308 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 PCP11498 1178 aaKnown RBP14.17□□□□□ -0.14
CLN8-207ENST00000524258 GCLCP48506 637 aaPredicted RBP14.17□□□□□ -0.14
CLN8-207ENST00000524258 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 ANKRD13CQ8N6S4 541 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 SYNPO2Q9UMS6 1093 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 ADAMTS5Q9UNA0 930 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 ZSWIM8A7E2V4 1837 aa14.17□□□□□ -0.14
CLN8-207ENST00000524258 F5H6K3 240 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
CLN8-207ENST00000524258 RANBP6O60518 1105 aaKnown RBP14.16□□□□□ -0.14
CLN8-207ENST00000524258 TTLL1O95922 423 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 NDUFB10O96000 172 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
CLN8-207ENST00000524258 KLRC3Q07444 240 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 MFSD6Q6ZSS7 791 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 SMCR8Q8TEV9 937 aaPredicted RBP14.16□□□□□ -0.14
CLN8-207ENST00000524258 SH2D4AQ9H788 454 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 EFCC1Q9HA90 598 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 BTBD7Q9P203 1132 aa14.16□□□□□ -0.14
CLN8-207ENST00000524258 TSPY2A6NKD2 308 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 DSG3P32926 999 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 PSMC4P43686 418 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 ATP2B2Q01814 1243 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 COL9A3Q14050 684 aaPredicted RBP14.15□□□□□ -0.14
CLN8-207ENST00000524258 COG2Q14746 738 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 PKN2Q16513 984 aaKnown RBP14.15□□□□□ -0.14
CLN8-207ENST00000524258 STOX1Q6ZVD7 989 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 GMCL1P1Q8NEA9 526 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
CLN8-207ENST00000524258 FBXO28Q9NVF7 368 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 PTPN22Q9Y2R2 807 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 RABGAP1Q9Y3P9 1069 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 TRIM17Q9Y577 477 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
CLN8-207ENST00000524258 LAMA4Q16363 1823 aa14.15□□□□□ -0.14
CLN8-207ENST00000524258 CDC45O75419 566 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 NECTIN1Q15223 517 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 IMMTQ16891 758 aaKnown RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 FAM83BQ5T0W9 1011 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 FBXO46Q6PJ61 603 aaPredicted RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 LRRC47Q8N1G4 583 aaKnown RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 REPS2Q8NFH8 660 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 ANKS1AQ92625 1134 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 RNF41Q9H4P4 317 aaPredicted RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 ZSWIM5Q9P217 1185 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 GJD2Q9UKL4 321 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 RBM8AQ9Y5S9 174 aaKnown RBP14.14□□□□□ -0.15
CLN8-207ENST00000524258 CENPFP49454 3210 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 MYPNQ86TC9 1320 aa14.14□□□□□ -0.15
CLN8-207ENST00000524258 B4E1Z4 1266 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 GNRH1P01148 92 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 NT5C2P49902 561 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 ERVK-9P63128 1117 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 ERVK-24P63145 666 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 RASGRP2Q7LDG7 609 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 GTF3C2Q8WUA4 911 aaPredicted RBP14.13□□□□□ -0.15
CLN8-207ENST00000524258 ATG4CQ96DT6 458 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 PORCNQ9H237 461 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 GOPCQ9HD26 462 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 HOXC10Q9NYD6 342 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 SRRDQ9UH36 339 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 GABRQQ9UN88 632 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 HPS5Q9UPZ3 1129 aa14.13□□□□□ -0.15
CLN8-207ENST00000524258 DOCK3Q8IZD9 2030 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 KDM4AO75164 1064 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 CYB5R4Q7L1T6 521 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 GPRC5AQ8NFJ5 357 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 ESR2Q92731 530 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 TTC14Q96N46 770 aa14.12□□□□□ -0.15
CLN8-207ENST00000524258 TANGO6Q9C0B7 1094 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms