RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZYXQ15942 572 aaKnown RBP24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 PPP4R3BQ5MIZ7 849 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 VPS53Q5VIR6 699 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 GPRC5AQ8NFJ5 357 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 DIAPH3Q9NSV4 1193 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 RBPJLQ9UBG7 517 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.85■■□□□ 1.572e-6■■■■■ 37.3
TRAPPC9-215ENST00000524162 PTCH2Q9Y6C5 1203 aa24.85■■□□□ 1.57
TRAPPC9-215ENST00000524162 WDR46O15213 610 aaKnown RBP24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 FGAP02671 866 aa24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 IRF5Q13568 498 aa24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 CENPQQ7L2Z9 268 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 ZNF589Q86UQ0 364 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 NEDD1Q8NHV4 660 aa24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 MKL1Q969V6 931 aa24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 RPAP3Q9H6T3 665 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 HOXC10Q9NYD6 342 aa24.84■■□□□ 1.57
TRAPPC9-215ENST00000524162 A0A0G2JMZ2 1700 aa24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 TNPO2O14787 897 aaKnown RBP24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 COG2Q14746 738 aa24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 COA7Q96BR5 231 aa24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 GOPCQ9HD26 462 aa24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 LAMA4Q16363 1823 aa24.83■■□□□ 1.57
TRAPPC9-215ENST00000524162 ORC4O43929 436 aa24.82■■□□□ 1.56
TRAPPC9-215ENST00000524162 GSPT1P15170 499 aaKnown RBP24.82■■□□□ 1.56
TRAPPC9-215ENST00000524162 SLC9C1Q4G0N8 1177 aa24.82■■□□□ 1.56
TRAPPC9-215ENST00000524162 ZNF333Q96JL9 665 aa24.82■■□□□ 1.56
TRAPPC9-215ENST00000524162 MAPK4P31152 587 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 ERVK-9P63128 1117 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 ERVK-24P63145 666 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 MB21D1Q8N884 522 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 TXNRD2Q9NNW7 524 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 MTMR4Q9NYA4 1195 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 RAD50Q92878 1312 aa24.81■■□□□ 1.56
TRAPPC9-215ENST00000524162 SPDYE16A6NNV3 312 aaPredicted RBP24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 CCNA1P78396 465 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 POTEEQ6S8J3 1075 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 CWC27Q6UX04 472 aaKnown RBP24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 CLEC10AQ8IUN9 316 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 RAET1EQ8TD07 263 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 PXYLP1Q8TE99 480 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 DSCC1Q9BVC3 393 aa24.8■■□□□ 1.56
TRAPPC9-215ENST00000524162 PLXNB2O15031 1838 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 TTLL1O95922 423 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 TSPY3P0CV98 308 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 TSPY8P0CW00 308 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 PRKCZQ05513 592 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 KIAA1755Q5JYT7 1200 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 SLAIN1Q8ND83 568 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 BRCA2P51587 3418 aa24.79■■□□□ 1.56
TRAPPC9-215ENST00000524162 PRDM1O75626 825 aa24.78■■□□□ 1.56
TRAPPC9-215ENST00000524162 FLT3LGP49771 235 aa24.78■■□□□ 1.56
TRAPPC9-215ENST00000524162 CEP95Q96GE4 821 aa24.78■■□□□ 1.56
TRAPPC9-215ENST00000524162 ADAMTS5Q9UNA0 930 aa24.78■■□□□ 1.56
TRAPPC9-215ENST00000524162 CNMDO75829 334 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 GRK4P32298 578 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 DSG3P32926 999 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 NOVP48745 357 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 TFAP4Q01664 338 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 GMCL1P1Q8NEA9 526 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 RUFY2Q8WXA3 655 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 SOCS4Q8WXH5 440 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 TANGO6Q9C0B7 1094 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 GJD2Q9UKL4 321 aa24.77■■□□□ 1.56
TRAPPC9-215ENST00000524162 ATP2B2Q01814 1243 aa24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 CTDSPL2Q05D32 466 aa24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 Q3C1V9 767 aa24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 STK11IPQ8N1F8 1099 aa24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 RNF41Q9H4P4 317 aaPredicted RBP24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 GABRQQ9UN88 632 aa24.76■■□□□ 1.55
TRAPPC9-215ENST00000524162 PDE4DIPQ5VU43 2346 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 F5H6K3 240 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 XRCC5P13010 732 aaKnown RBP24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 KLRC3Q07444 240 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 SPICE1Q8N0Z3 855 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 STAG1Q8WVM7 1258 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 TCP11L1Q9NUJ3 509 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 CLIP2Q9UDT6 1046 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 CTNNA3Q9UI47 895 aa24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 COL11A1P12107 1806 aaPredicted RBP24.75■■□□□ 1.55
TRAPPC9-215ENST00000524162 TSPY2A6NKD2 308 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 FLOT1O75955 427 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 CAPN2P17655 700 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 AKNAD1Q5T1N1 836 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 SHCBP1Q8NEM2 672 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 PAGR1Q9BTK6 254 aa24.74■■□□□ 1.55
TRAPPC9-215ENST00000524162 ZNF236Q9UL36 1845 aa24.73■■□□□ 1.55
TRAPPC9-215ENST00000524162 ADCY3O60266 1144 aa24.73■■□□□ 1.55
TRAPPC9-215ENST00000524162 CHMLP26374 656 aa24.73■■□□□ 1.55
TRAPPC9-215ENST00000524162 PORCNQ9H237 461 aa24.73■■□□□ 1.55
TRAPPC9-215ENST00000524162 BTBD7Q9P203 1132 aa24.73■■□□□ 1.55
TRAPPC9-215ENST00000524162 ZNF213O14771 459 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 NDUFB10O96000 172 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 FAM47AQ5JRC9 791 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 MFSD6Q6ZSS7 791 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 CCAR1Q8IX12 1150 aaKnown RBP24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 TRMT44Q8IYL2 757 aaKnown RBP24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 USP6NLQ92738 828 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 NUDT12Q9BQG2 462 aa24.72■■□□□ 1.55
TRAPPC9-215ENST00000524162 PPP1R9AQ9ULJ8 1098 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms