RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 PLS1Q14651 629 aa31.43■■■□□ 2.62
PVT1-219ENST00000523427 SDR42E1Q8WUS8 393 aa31.43■■■□□ 2.62
PVT1-219ENST00000523427 ATP11BQ9Y2G3 1177 aa31.43■■■□□ 2.62
PVT1-219ENST00000523427 DNM1LO00429 736 aa31.42■■■□□ 2.62
PVT1-219ENST00000523427 PDE6AP16499 860 aa31.42■■■□□ 2.62
PVT1-219ENST00000523427 RTP1P59025 263 aa31.42■■■□□ 2.62
PVT1-219ENST00000523427 SLC44A5Q8NCS7 719 aa31.42■■■□□ 2.62
PVT1-219ENST00000523427 DNAJC2Q99543 621 aaKnown RBP31.42■■■□□ 2.62
PVT1-219ENST00000523427 HOXC10Q9NYD6 342 aa31.42■■■□□ 2.62
PVT1-219ENST00000523427 GABPAQ06546 454 aa31.41■■■□□ 2.62
PVT1-219ENST00000523427 TTF1Q15361 905 aaPredicted RBP31.41■■■□□ 2.62
PVT1-219ENST00000523427 ZNF532Q9HCE3 1301 aa31.41■■■□□ 2.62
PVT1-219ENST00000523427 GOLIM4O00461 696 aa31.4■■■□□ 2.62
PVT1-219ENST00000523427 CYBAP13498 195 aa31.4■■■□□ 2.62
PVT1-219ENST00000523427 ERCC3P19447 782 aa31.4■■■□□ 2.62
PVT1-219ENST00000523427 HNRNPUQ00839 825 aaKnown RBP eCLIP31.4■■■□□ 2.621e-6■■■■□ 21.2
PVT1-219ENST00000523427 SPATC1LQ9H0A9 340 aa31.4■■■□□ 2.62
PVT1-219ENST00000523427 FRMPD3Q5JV73 1810 aa31.4■■■□□ 2.62
PVT1-219ENST00000523427 KIAA1755Q5JYT7 1200 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 PRAMEF19Q5SWL8 479 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 TMED8Q6PL24 325 aaPredicted RBP31.39■■■□□ 2.62
PVT1-219ENST00000523427 NCAPG2Q86XI2 1143 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 CLEC10AQ8IUN9 316 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 SPICE1Q8N0Z3 855 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 LCORLQ8N3X6 602 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 PANK1Q8TE04 598 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 DYNLL2Q96FJ2 89 aa31.39■■■□□ 2.62
PVT1-219ENST00000523427 PRDM5Q9NQX1 630 aaPredicted RBP31.39■■■□□ 2.62
PVT1-219ENST00000523427 DNAH12Q6ZR08 3092 aa31.38■■■□□ 2.61
PVT1-219ENST00000523427 ARRDC4Q8NCT1 418 aa31.38■■■□□ 2.61
PVT1-219ENST00000523427 RHPN1Q8TCX5 695 aa31.38■■■□□ 2.61
PVT1-219ENST00000523427 STRNO43815 780 aa31.37■■■□□ 2.61
PVT1-219ENST00000523427 COBLO75128 1261 aa31.37■■■□□ 2.61
PVT1-219ENST00000523427 ARMT1Q9H993 441 aa31.37■■■□□ 2.61
PVT1-219ENST00000523427 DCP1AQ9NPI6 582 aaPredicted RBP31.37■■■□□ 2.61
PVT1-219ENST00000523427 KBTBD13C9JR72 458 aa31.36■■■□□ 2.61
PVT1-219ENST00000523427 NAV1Q8NEY1 1877 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 FLOT1O75955 427 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 SLFNL1Q499Z3 407 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 HSP90AB4PQ58FF6 505 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 OLFML2BQ68BL8 750 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 TMEM179Q6ZVK1 233 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 FERMT2Q96AC1 680 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 ATG4CQ96DT6 458 aa31.35■■■□□ 2.61
PVT1-219ENST00000523427 POTEB2H3BUK9 544 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 PRKAB2O43741 272 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 AKR1B1P15121 316 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 DSG3P32926 999 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 SLC39A5Q6ZMH5 540 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 CLASRPQ8N2M8 674 aaKnown RBP31.34■■■□□ 2.61
PVT1-219ENST00000523427 GUCD1Q96NT3 240 aa31.34■■■□□ 2.61
PVT1-219ENST00000523427 IFIT2P09913 472 aaKnown RBP31.33■■■□□ 2.61
PVT1-219ENST00000523427 SHCBP1Q8NEM2 672 aa31.33■■■□□ 2.61
PVT1-219ENST00000523427 ARHGEF10LQ9HCE6 1279 aa31.33■■■□□ 2.61
PVT1-219ENST00000523427 SLC5A4Q9NY91 659 aa31.33■■■□□ 2.61
PVT1-219ENST00000523427 TCRBV5S4A2TA0A5A2 114 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 SEPT4O43236 478 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 IGHA2P01877 340 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 ADCYAP1R1P41586 468 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 ICA1Q05084 483 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 TRIM60Q495X7 471 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 MROH8Q9H579 483 aa31.32■■■□□ 2.6
PVT1-219ENST00000523427 CYP2D7A0A087X1C5 515 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 SMIM22K7EJ46 135 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 SHHQ15465 462 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 SIAH1Q8IUQ4 282 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 MB21D1Q8N884 522 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 SWAP70Q9UH65 585 aa31.31■■■□□ 2.6
PVT1-219ENST00000523427 MBD4O95243 580 aa31.3■■■□□ 2.6
PVT1-219ENST00000523427 ZNF697Q5TEC3 545 aa31.3■■■□□ 2.6
PVT1-219ENST00000523427 BADQ92934 168 aa31.3■■■□□ 2.6
PVT1-219ENST00000523427 RAD21O60216 631 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 FAM47AQ5JRC9 791 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 C9orf50Q5SZB4 431 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 FAM109BQ6ICB4 259 aaPredicted RBP31.29■■■□□ 2.6
PVT1-219ENST00000523427 KIF1BPQ96EK5 621 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 BOLA2Q9H3K6 86 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 TMX2Q9Y320 296 aa31.29■■■□□ 2.6
PVT1-219ENST00000523427 FCER1AP12319 257 aa31.28■■■□□ 2.6
PVT1-219ENST00000523427 PHF6Q8IWS0 365 aaKnown RBP eCLIP31.28■■■□□ 2.6
PVT1-219ENST00000523427 MAML3Q96JK9 1138 aa31.28■■■□□ 2.6
PVT1-219ENST00000523427 SH2D4AQ9H788 454 aa31.28■■■□□ 2.6
PVT1-219ENST00000523427 VCPKMTQ9H867 229 aa31.28■■■□□ 2.6
PVT1-219ENST00000523427 TMEM132BQ14DG7 1078 aa31.27■■■□□ 2.6
PVT1-219ENST00000523427 LRRC41Q15345 812 aa31.27■■■□□ 2.6
PVT1-219ENST00000523427 SH3RF1Q7Z6J0 888 aa31.27■■■□□ 2.6
PVT1-219ENST00000523427 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.26■■■□□ 2.59
PVT1-219ENST00000523427 MMP19Q99542 508 aa31.26■■■□□ 2.59
PVT1-219ENST00000523427 COL25A1Q9BXS0 654 aaPredicted RBP31.26■■■□□ 2.59
PVT1-219ENST00000523427 FBXO28Q9NVF7 368 aa31.26■■■□□ 2.59
PVT1-219ENST00000523427 PAG1Q9NWQ8 432 aa31.26■■■□□ 2.59
PVT1-219ENST00000523427 LAMA2P24043 3122 aaKnown RBP31.26■■■□□ 2.59
PVT1-219ENST00000523427 CHGBP05060 677 aa31.25■■■□□ 2.59
PVT1-219ENST00000523427 PGK2P07205 417 aa31.25■■■□□ 2.59
PVT1-219ENST00000523427 CDK8P49336 464 aa31.25■■■□□ 2.59
PVT1-219ENST00000523427 RLFQ13129 1914 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 USP17L12C9JPN9 530 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 USP17L21D6R901 530 aa31.24■■■□□ 2.59
PVT1-219ENST00000523427 WDR46O15213 610 aaKnown RBP31.24■■■□□ 2.59
PVT1-219ENST00000523427 EEF2P13639 858 aaKnown RBP31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms