RNA–Protein interactions for RNA: ENST00000523417.5

TOP1MT-217, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 698 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-217ENST00000523417 USP17L12C9JPN9 530 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 USP17L21D6R901 530 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 CYP2D6P10635 497 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 COL6A1P12109 1028 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 DSG3P32926 999 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 CDK8P49336 464 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 CCL14Q16627 93 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 GIMAP6Q6P9H5 292 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 C16orf86Q6ZW13 317 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 DYNLL2Q96FJ2 89 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 C11orf49Q9H6J7 331 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 ECHDC1Q9NTX5 307 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 ADAMTS5Q9UNA0 930 aa15.23■□□□□ 0.03
TOP1MT-217ENST00000523417 MPHOSPH10O00566 681 aaKnown RBP15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 SLFNL1Q499Z3 407 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 SBK1Q52WX2 424 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 KIAA1755Q5JYT7 1200 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 MFSD14CQ5VZR4 134 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 CTR9Q6PD62 1173 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 AMOTL1Q8IY63 956 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 ABRAQ8N0Z2 381 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 SLC44A5Q8NCS7 719 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 STRBPQ96SI9 672 aaKnown RBP15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 PUS7LQ9H0K6 701 aaKnown RBP15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 SH2D4AQ9H788 454 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 VCPKMTQ9H867 229 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 KANSL2Q9H9L4 492 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 IVNS1ABPQ9Y6Y0 642 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 TRIOBPQ9H2D6 2365 aa15.22■□□□□ 0.03
TOP1MT-217ENST00000523417 DDX60LQ5H9U9 1706 aaKnown RBP15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 AKR1B1P15121 316 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 DDRGK1Q96HY6 314 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 GDF15Q99988 308 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 SPATC1LQ9H0A9 340 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 ARHGEF10LQ9HCE6 1279 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 FLRT1Q9NZU1 646 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 SLC4A4Q9Y6R1 1079 aa15.21■□□□□ 0.03
TOP1MT-217ENST00000523417 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 MSCO60682 206 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 CCND3P30281 292 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 ATP2B2Q01814 1243 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 OLFML2BQ68BL8 750 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 KBTBD3Q8NAB2 608 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 MROH8Q9H579 483 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 CWC22Q9HCG8 908 aaKnown RBP15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
TOP1MT-217ENST00000523417 GSG1L2A8MUP6 293 aa15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 WDR46O15213 610 aaKnown RBP15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 CHGBP05060 677 aa15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 ICA1Q05084 483 aa15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 NPLOC4Q8TAT6 608 aa15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 ARPP21Q9UBL0 812 aaPredicted RBP15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 STAP2Q9UGK3 403 aa15.19■□□□□ 0.02
TOP1MT-217ENST00000523417 PFASO15067 1338 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 SMIM22K7EJ46 135 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 SLC25A27O95847 323 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 ERCC3P19447 782 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 SLC5A4Q9NY91 659 aa15.18■□□□□ 0.02
TOP1MT-217ENST00000523417 RNF113AO15541 343 aaKnown RBP15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 FLOT1O75955 427 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 GNAT2P19087 354 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 ADORA2AP29274 412 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 WDR78Q5VTH9 848 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 DPP9Q86TI2 863 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 APPBP2Q92624 585 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 OSBP2Q969R2 916 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 GPATCH3Q96I76 525 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 NYAP2Q9P242 653 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 DDX20Q9UHI6 824 aaKnown RBP15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 TTC41PQ6P2S7 1318 aa15.17■□□□□ 0.02
TOP1MT-217ENST00000523417 COBLO75128 1261 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 CYBAP13498 195 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 LRRFIP1Q32MZ4 808 aaKnown RBP15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 GPR153Q6NV75 609 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 TRPV1Q8NER1 839 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 MKL1Q969V6 931 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 ATG4CQ96DT6 458 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 SYNPO2Q9UMS6 1093 aa15.16■□□□□ 0.02
TOP1MT-217ENST00000523417 PATL2C9JE40 543 aaKnown RBP15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 RASA1P20936 1047 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 CYP2C19P33261 490 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 TMEM132BQ14DG7 1078 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 RIOX2Q8IUF8 465 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 C7orf61Q8IZ16 206 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 SPICE1Q8N0Z3 855 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 GOPCQ9HD26 462 aa15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 DIS3Q9Y2L1 958 aaKnown RBP15.15■□□□□ 0.02
TOP1MT-217ENST00000523417 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
TOP1MT-217ENST00000523417 RANBP2P49792 3224 aaKnown RBP15.14■□□□□ 0.01
TOP1MT-217ENST00000523417 IGKV6D-41A0A0C4DH26 115 aa15.14■□□□□ 0.01
TOP1MT-217ENST00000523417 VWA5AO00534 786 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms