RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 ATP6V1DQ9Y5K8 247 aa9.24□□□□□ -0.93
HMGB4-204ENST00000522796 STXBP3O00186 592 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 FANCGO15287 622 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 STAM2O75886 525 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 ENDOUP21128 410 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 RBM43Q6ZSC3 357 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 SMC1BQ8NDV3 1235 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 GSDMBQ8TAX9 411 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 GCC1Q96CN9 775 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 HVCN1Q96D96 273 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 STAMBPL1Q96FJ0 436 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 NACAP1Q9BZK3 213 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 FHOD3Q2V2M9 1422 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 ABCC11Q96J66 1382 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 CHL1O00533 1208 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 HOXA2O43364 376 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 FOXD2O60548 495 aaPredicted RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 ATP6V1G2O95670 118 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 TROVE2P10155 538 aaKnown RBP eCLIP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 XRCC4Q13426 336 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 SEPT7Q16181 437 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 MEX3CQ5U5Q3 659 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 ALKBH2Q6NS38 261 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 RSPH3Q86UC2 560 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 DYDC1Q8WWB3 177 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 SYTL4Q96C24 671 aaPredicted RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 MAML3Q96JK9 1138 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 RNPC3Q96LT9 517 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 XPO4Q9C0E2 1151 aaKnown RBP9.23□□□□□ -0.93
HMGB4-204ENST00000522796 SLC5A4Q9NY91 659 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 TBK1Q9UHD2 729 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 TTLL3Q9Y4R7 772 aa9.23□□□□□ -0.93
HMGB4-204ENST00000522796 LRRIQ3A6PVS8 624 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 ANP32DO95626 131 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 SCG2P13521 617 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 CCNCP24863 283 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 GNGT1P63211 74 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 KAZNQ674X7 775 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 LLGL2Q6P1M3 1020 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 PI16Q6UXB8 463 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 BPHLQ86WA6 291 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 ANKRD27Q96NW4 1050 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 NAP1L3Q99457 506 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 OSBPL1AQ9BXW6 950 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 NOD2Q9HC29 1040 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 USP16Q9Y5T5 823 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 TARSL2A2RTX5 802 aaKnown RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 TMEM247A6NEH6 219 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 CHMP4BP1P59074 171 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 MXRA7P84157 204 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 AMPD3Q01432 767 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 LBRQ14739 615 aaKnown RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 MUM1Q2TAK8 710 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 RNF187Q5TA31 235 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 MAATS1Q7Z4T9 603 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 SRGAP1Q7Z6B7 1085 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 NT5DC4Q86YG4 428 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 LILRB1Q8NHL6 650 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 APPBP2Q92624 585 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 MRRFQ96E11 262 aaKnown RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 BPIFA3Q9BQP9 254 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 IER2Q9BTL4 223 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 MRPL46Q9H2W6 279 aaKnown RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 DMAP1Q9NPF5 467 aaPredicted RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 NOP53Q9NZM5 478 aaKnown RBP9.22□□□□□ -0.93
HMGB4-204ENST00000522796 PCSK1NQ9UHG2 260 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 TNNQ9UQP3 1299 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
HMGB4-204ENST00000522796 TCHHQ07283 1943 aa9.21□□□□□ -0.93
HMGB4-204ENST00000522796 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.93
HMGB4-204ENST00000522796 A0A0B4J203 849 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 GOLGA6L4A6NEF3 574 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 CSPG5O95196 566 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 PDGFRBP09619 1106 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 BPIFB4P59827 614 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 RIPK1Q13546 671 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SGSM1Q2NKQ1 1148 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SH2D4BQ5SQS7 431 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 C10orf62Q5T681 223 aaPredicted RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 FIP1L1Q6UN15 594 aaKnown RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 CCDC121Q6ZUS5 278 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 FCHSD1Q86WN1 690 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 WDR66Q8TBY9 1149 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 USP6NLQ92738 828 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 UROC1Q96N76 676 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 ZMAT2Q96NC0 199 aaKnown RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 PNKPQ96T60 521 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SH3GL2Q99962 352 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SUGCTQ9HAC7 445 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 DDX19BQ9UMR2 479 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 ATP1B4Q9UN42 357 aaPredicted RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 CARD8Q9Y2G2 431 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SH3GLB1Q9Y371 365 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SSBP05455 408 aaKnown RBP eCLIP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 HSPA8P11142 646 aaKnown RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 ADRA2BP18089 450 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 EIF2S2P20042 333 aaKnown RBP9.21□□□□□ -0.94
HMGB4-204ENST00000522796 SESTD1Q86VW0 696 aa9.21□□□□□ -0.94
HMGB4-204ENST00000522796 ANKRD49Q8WVL7 239 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms