RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 CLEC10AQ8IUN9 316 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 SIAH1Q8IUQ4 282 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 SDR42E1Q8WUS8 393 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 MCM9Q9NXL9 1143 aa18.54■□□□□ 0.56
TRAPPC9-213ENST00000522504 FRMPD3Q5JV73 1810 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 ZNF532Q9HCE3 1301 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 MPHOSPH10O00566 681 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 COBLO75128 1261 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 ADORA2AP29274 412 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 COG2Q14746 738 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 ANO1Q5XXA6 986 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 ERC1Q8IUD2 1116 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 LCORLQ8N3X6 602 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 RHPN1Q8TCX5 695 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 DYNLL2Q96FJ2 89 aa18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 CRNKL1Q9BZJ0 848 aaKnown RBP18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 DCP1AQ9NPI6 582 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC9-213ENST00000522504 POTEB2H3BUK9 544 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 DNM1LO00429 736 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 GOLIM4O00461 696 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 ERCC3P19447 782 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 GJC2Q5T442 439 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 TANGO6Q9C0B7 1094 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 SPATC1LQ9H0A9 340 aa18.52■□□□□ 0.56
TRAPPC9-213ENST00000522504 SPTBN5Q9NRC6 3674 aaKnown RBP18.52■□□□□ 0.55
TRAPPC9-213ENST00000522504 APBB1O00213 710 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 PRKAB2O43741 272 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 MSCO60682 206 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 RTP1P59025 263 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 HNRNPUQ00839 825 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 TTF1Q15361 905 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 PRAMEF19Q5SWL8 479 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 OLFML2BQ68BL8 750 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 DPP9Q86TI2 863 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 ARMT1Q9H993 441 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 HOXC10Q9NYD6 342 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 RLFQ13129 1914 aa18.51■□□□□ 0.55
TRAPPC9-213ENST00000522504 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
TRAPPC9-213ENST00000522504 CHGBP05060 677 aa18.5■□□□□ 0.55
TRAPPC9-213ENST00000522504 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
TRAPPC9-213ENST00000522504 SPICE1Q8N0Z3 855 aa18.5■□□□□ 0.55
TRAPPC9-213ENST00000522504 GUCD1Q96NT3 240 aa18.5■□□□□ 0.55
TRAPPC9-213ENST00000522504 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 STRNO43815 780 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 AKR1B1P15121 316 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 DSG3P32926 999 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 TMEM179Q6ZVK1 233 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 SHCBP1Q8NEM2 672 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 ATG4CQ96DT6 458 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 LBHD1Q9BQE6 289 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 BCL11AQ9H165 835 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 ATP11BQ9Y2G3 1177 aa18.49■□□□□ 0.55
TRAPPC9-213ENST00000522504 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAPPC9-213ENST00000522504 FAM161BQ96MY7 647 aa18.48■□□□□ 0.55
TRAPPC9-213ENST00000522504 A0A0G2JMZ2 1700 aa18.48■□□□□ 0.55
TRAPPC9-213ENST00000522504 ZNF236Q9UL36 1845 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 SEPT4O43236 478 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 FLOT1O75955 427 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 MBD4O95243 580 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 PLS1Q14651 629 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 HSP90AB4PQ58FF6 505 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 FAM109BQ6ICB4 259 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 SLC39A5Q6ZMH5 540 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 NCAPG2Q86XI2 1143 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 TMX2Q9Y320 296 aa18.47■□□□□ 0.55
TRAPPC9-213ENST00000522504 ICA1Q05084 483 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 TMEM132BQ14DG7 1078 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 SHHQ15465 462 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 TRIM60Q495X7 471 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 C9orf50Q5SZB4 431 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 SAMD1Q6SPF0 538 aaPredicted RBP18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 CLASRPQ8N2M8 674 aaKnown RBP18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 MB21D1Q8N884 522 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 ARRDC4Q8NCT1 418 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 KIF1BPQ96EK5 621 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 MAML3Q96JK9 1138 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 MROH8Q9H579 483 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 VCPKMTQ9H867 229 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 SWAP70Q9UH65 585 aa18.46■□□□□ 0.55
TRAPPC9-213ENST00000522504 MYCNP04198 464 aaPredicted RBP18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 IFIT2P09913 472 aaKnown RBP18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 ADD2P35612 726 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 ADCYAP1R1P41586 468 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 SNX17Q15036 470 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 LRRC41Q15345 812 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 FAM47AQ5JRC9 791 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 SH3RF1Q7Z6J0 888 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 ABRAQ8N0Z2 381 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 FERMT2Q96AC1 680 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 BOLA2Q9H3K6 86 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 FBXO28Q9NVF7 368 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 PAG1Q9NWQ8 432 aa18.45■□□□□ 0.54
TRAPPC9-213ENST00000522504 LTBP2Q14767 1821 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 TRIM43BA6NCK2 446 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 KBTBD13C9JR72 458 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 CDK8P49336 464 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 C12orf60Q5U649 245 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 BADQ92934 168 aa18.44■□□□□ 0.54
TRAPPC9-213ENST00000522504 TRIM43Q96BQ3 446 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms