RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 TMEM259Q4ZIN3 620 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 TNNI3KQ59H18 835 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 ZKSCAN2Q63HK3 967 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 NECAB2Q7Z6G3 386 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 CCDC84Q86UT8 332 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 METTL16Q86W50 562 aaKnown RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 FOXP4Q8IVH2 680 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 TRMT44Q8IYL2 757 aaKnown RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 SSH3Q8TE77 659 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 SH3RF3Q8TEJ3 882 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 SOCS4Q8WXH5 440 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 ARID3AQ99856 593 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 TRIM34Q9BYJ4 488 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 SNRKQ9NRH2 765 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 AATFQ9NY61 560 aaKnown RBP eCLIP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 TMOD4Q9NZQ9 345 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 FPGT-TNNI3KV9GXZ4 949 aa8.36□□□□□ -1.07
SH2D4A-205ENST00000522328 FLT1P17948 1338 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 RPTORQ8N122 1335 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 USP17L10C9JJH3 530 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 HLA-DOAP06340 250 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 CRACR2BQ8N4Y2 399 aaPredicted RBP8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 ATAD5Q96QE3 1844 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 LAMA3Q16787 3333 aa8.35□□□□□ -1.07
SH2D4A-205ENST00000522328 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 BCAR3O75815 825 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 CYP2E1P05181 493 aaPredicted RBP8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 XRCC5P13010 732 aaKnown RBP8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 MAPK4P31152 587 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 HERVK_113P62684 666 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 MTMR2Q13614 643 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 PDE3AQ14432 1141 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 RRP1BQ14684 758 aaKnown RBP8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 MAPKAPK5Q8IW41 473 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 TMEM57Q8N5G2 664 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 GPRC5AQ8NFJ5 357 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 TGFBRAP1Q8WUH2 860 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 DBNDD2Q9BQY9 259 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 GJD2Q9UKL4 321 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 ZBTB21Q9ULJ3 1066 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 COG6Q9Y2V7 657 aa8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 NOP58Q9Y2X3 529 aaKnown RBP8.34□□□□□ -1.07
SH2D4A-205ENST00000522328 SURF6O75683 361 aaKnown RBP8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 NDUFV2P19404 249 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 MAP3K21Q5TCX8 1036 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 CCAR1Q8IX12 1150 aaKnown RBP8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 C12orf42Q96LP6 360 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 NBPF3Q9H094 633 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 EHD4Q9H223 541 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 DNAJC18Q9H819 358 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 KIAA1468Q9P260 1216 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 OGDHLQ9ULD0 1010 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 PALD1Q9ULE6 856 aa8.33□□□□□ -1.08
SH2D4A-205ENST00000522328 A0A0C4DFX4 3053 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 SIPA1L1O43166 1804 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 FOCADQ5VW36 1801 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 RAD21O60216 631 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 LILRB3O75022 631 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 GLRX3O76003 335 aaKnown RBP8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ZKSCAN1P17029 563 aaPredicted RBP8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 CYP7A1P22680 504 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 BMP8BP34820 402 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 RGS2P41220 211 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ZAP70P43403 619 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 USP14P54578 494 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ERVK-9P63128 1117 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ERVK-24P63145 666 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 CCNA1P78396 465 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 MAP3K12Q12852 859 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 QPCTQ16769 361 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ADGRA1Q86SQ6 560 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 TTC6Q86TZ1 520 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 ERC1Q8IUD2 1116 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 RDH13Q8NBN7 331 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 TRIB2Q92519 343 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 P2RX7Q99572 595 aaKnown RBP8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 PIH1D3Q9NQM4 214 aaKnown RBP8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 SERPINB13Q9UIV8 391 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 DBNLQ9UJU6 430 aaKnown RBP8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 TNNQ9UQP3 1299 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
SH2D4A-205ENST00000522328 COL6A3P12111 3177 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 DOCK3Q8IZD9 2030 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
SH2D4A-205ENST00000522328 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms