RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 SHROOM1Q2M3G4 852 aaPredicted RBP11.22□□□□□ -0.61
CLK4-209ENST00000521621 AKNAD1Q5T1N1 836 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 OTOP1Q7RTM1 612 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 SHCBP1Q8NEM2 672 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 GMCL1Q96IK5 515 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 MAF1Q9H063 256 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 BCL11AQ9H165 835 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 HOXC10Q9NYD6 342 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 PTPN22Q9Y2R2 807 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 U3KPZ7 1027 aaPredicted RBP11.22□□□□□ -0.61
CLK4-209ENST00000521621 EEF2P13639 858 aaKnown RBP11.22□□□□□ -0.61
CLK4-209ENST00000521621 COPB2P35606 906 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 CWC27Q6UX04 472 aaKnown RBP11.22□□□□□ -0.61
CLK4-209ENST00000521621 ACER1Q8TDN7 264 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 MCOLN1Q9GZU1 580 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 NBPF3Q9H094 633 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 CNNM2Q9H8M5 875 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 FCGRTP55899 365 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 HERVK_113P62684 666 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 TNS4Q8IZW8 715 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 MAP4K1Q92918 833 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 ARMC5Q96C12 935 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
CLK4-209ENST00000521621 MPHOSPH10O00566 681 aaKnown RBP11.21□□□□□ -0.61
CLK4-209ENST00000521621 ATP2A1O14983 1001 aa11.21□□□□□ -0.61
CLK4-209ENST00000521621 COG2Q14746 738 aa11.21□□□□□ -0.61
CLK4-209ENST00000521621 CCDC84Q86UT8 332 aaPredicted RBP11.21□□□□□ -0.61
CLK4-209ENST00000521621 SMIM22K7EJ46 135 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 ZNF213O14771 459 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 DSG3P32926 999 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 IRX3P78415 501 aaPredicted RBP11.21□□□□□ -0.62
CLK4-209ENST00000521621 IMMTQ16891 758 aaKnown RBP11.21□□□□□ -0.62
CLK4-209ENST00000521621 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.62
CLK4-209ENST00000521621 FEZ1Q99689 392 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 KRT23Q9C075 422 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 EFCC1Q9HA90 598 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 TACC3Q9Y6A5 838 aa11.21□□□□□ -0.62
CLK4-209ENST00000521621 CNMDO75829 334 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 TSPY3P0CV98 308 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 TSPY8P0CW00 308 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 CYP2C8P10632 490 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 MAPK4P31152 587 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 DGKZQ13574 1117 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 DGKHQ86XP1 1220 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 CD99L2Q8TCZ2 262 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 P2RX7Q99572 595 aaKnown RBP11.2□□□□□ -0.62
CLK4-209ENST00000521621 RPAP3Q9H6T3 665 aaPredicted RBP11.2□□□□□ -0.62
CLK4-209ENST00000521621 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 SRRDQ9UH36 339 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 OAZ1P54368 228 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 TFAP4Q01664 338 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 GPRC5AQ8NFJ5 357 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 ESYT1Q9BSJ8 1104 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 IL17RBQ9NRM6 502 aa11.2□□□□□ -0.62
CLK4-209ENST00000521621 CEP350Q5VT06 3117 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 ZSWIM8A7E2V4 1837 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 ABRAQ8N0Z2 381 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 SMCR8Q8TEV9 937 aaPredicted RBP11.19□□□□□ -0.62
CLK4-209ENST00000521621 ESR2Q92731 530 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 CEP95Q96GE4 821 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 CPA4Q9UI42 421 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 PNMA2Q9UL42 364 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 SPDYE16A6NNV3 312 aaPredicted RBP11.19□□□□□ -0.62
CLK4-209ENST00000521621 CDC45O75419 566 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 CCNA1P78396 465 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 CTDSPL2Q05D32 466 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 IFFO2Q5TF58 517 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 DCAF4Q8WV16 495 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 USP6NLQ92738 828 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 TRIM47Q96LD4 638 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 LSG1Q9H089 658 aaKnown RBP11.19□□□□□ -0.62
CLK4-209ENST00000521621 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
CLK4-209ENST00000521621 EIF5BO60841 1220 aaKnown RBP11.18□□□□□ -0.62
CLK4-209ENST00000521621 IGHA2P01877 340 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 SNHG28P0DPA3 235 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 TOP1P11387 765 aaKnown RBP11.18□□□□□ -0.62
CLK4-209ENST00000521621 XRCC5P13010 732 aaKnown RBP11.18□□□□□ -0.62
CLK4-209ENST00000521621 KIAA1755Q5JYT7 1200 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 CASC1Q6TDU7 716 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 BTNL9Q6UXG8 535 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 TBC1D10CQ8IV04 446 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 SOCS4Q8WXH5 440 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 KCNB2Q92953 911 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 IL25Q9H293 177 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 F5H6K3 240 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 CTGFP29279 349 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 RGS19P49795 217 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 ERVK-9P63128 1117 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 ERVK-24P63145 666 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 KLRC3Q07444 240 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 FAM160B2Q86V87 743 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 REPS2Q8NFH8 660 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 PPP1R9AQ9ULJ8 1098 aa11.18□□□□□ -0.62
CLK4-209ENST00000521621 HPS5Q9UPZ3 1129 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms